Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6538 | 19837;19838;19839 | chr2:178728212;178728211;178728210 | chr2:179592939;179592938;179592937 |
N2AB | 6221 | 18886;18887;18888 | chr2:178728212;178728211;178728210 | chr2:179592939;179592938;179592937 |
N2A | 5294 | 16105;16106;16107 | chr2:178728212;178728211;178728210 | chr2:179592939;179592938;179592937 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/P | rs1376037086 | None | 1.0 | D | 0.894 | 0.851 | 0.919609823937 | gnomAD-4.0.0 | 4.77943E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 5.55494E-05 | None | 0 | 0 | 0 | 0 | 3.02828E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.8228 | likely_pathogenic | 0.8809 | pathogenic | -2.758 | Highly Destabilizing | 0.997 | D | 0.778 | deleterious | None | None | None | None | N |
L/C | 0.8665 | likely_pathogenic | 0.901 | pathogenic | -1.995 | Destabilizing | 1.0 | D | 0.82 | deleterious | None | None | None | None | N |
L/D | 0.9982 | likely_pathogenic | 0.9989 | pathogenic | -3.479 | Highly Destabilizing | 1.0 | D | 0.899 | deleterious | None | None | None | None | N |
L/E | 0.985 | likely_pathogenic | 0.99 | pathogenic | -3.172 | Highly Destabilizing | 1.0 | D | 0.876 | deleterious | None | None | None | None | N |
L/F | 0.3467 | ambiguous | 0.3947 | ambiguous | -1.609 | Destabilizing | 1.0 | D | 0.762 | deleterious | None | None | None | None | N |
L/G | 0.965 | likely_pathogenic | 0.9753 | pathogenic | -3.318 | Highly Destabilizing | 1.0 | D | 0.877 | deleterious | None | None | None | None | N |
L/H | 0.9588 | likely_pathogenic | 0.9731 | pathogenic | -3.009 | Highly Destabilizing | 1.0 | D | 0.898 | deleterious | None | None | None | None | N |
L/I | 0.2165 | likely_benign | 0.301 | benign | -1.053 | Destabilizing | 0.985 | D | 0.705 | prob.neutral | None | None | None | None | N |
L/K | 0.9713 | likely_pathogenic | 0.9787 | pathogenic | -2.117 | Highly Destabilizing | 1.0 | D | 0.877 | deleterious | None | None | None | None | N |
L/M | 0.1716 | likely_benign | 0.1822 | benign | -1.353 | Destabilizing | 0.999 | D | 0.758 | deleterious | D | 0.538828504 | None | None | N |
L/N | 0.9905 | likely_pathogenic | 0.9944 | pathogenic | -2.839 | Highly Destabilizing | 1.0 | D | 0.902 | deleterious | None | None | None | None | N |
L/P | 0.9889 | likely_pathogenic | 0.9937 | pathogenic | -1.617 | Destabilizing | 1.0 | D | 0.894 | deleterious | D | 0.581166306 | None | None | N |
L/Q | 0.9219 | likely_pathogenic | 0.9445 | pathogenic | -2.489 | Highly Destabilizing | 1.0 | D | 0.9 | deleterious | D | 0.569810001 | None | None | N |
L/R | 0.9404 | likely_pathogenic | 0.9571 | pathogenic | -2.199 | Highly Destabilizing | 1.0 | D | 0.891 | deleterious | D | 0.581166306 | None | None | N |
L/S | 0.9616 | likely_pathogenic | 0.9774 | pathogenic | -3.298 | Highly Destabilizing | 1.0 | D | 0.873 | deleterious | None | None | None | None | N |
L/T | 0.9072 | likely_pathogenic | 0.9462 | pathogenic | -2.84 | Highly Destabilizing | 0.999 | D | 0.81 | deleterious | None | None | None | None | N |
L/V | 0.2219 | likely_benign | 0.2958 | benign | -1.617 | Destabilizing | 0.767 | D | 0.417 | neutral | D | 0.54318337 | None | None | N |
L/W | 0.8019 | likely_pathogenic | 0.8538 | pathogenic | -1.967 | Destabilizing | 1.0 | D | 0.869 | deleterious | None | None | None | None | N |
L/Y | 0.9026 | likely_pathogenic | 0.9268 | pathogenic | -1.844 | Destabilizing | 1.0 | D | 0.827 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.