Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6550 | 19873;19874;19875 | chr2:178728176;178728175;178728174 | chr2:179592903;179592902;179592901 |
N2AB | 6233 | 18922;18923;18924 | chr2:178728176;178728175;178728174 | chr2:179592903;179592902;179592901 |
N2A | 5306 | 16141;16142;16143 | chr2:178728176;178728175;178728174 | chr2:179592903;179592902;179592901 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/D | rs1333479032 | None | 0.003 | N | 0.179 | 0.08 | 0.17258766438 | gnomAD-4.0.0 | 4.11047E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.4014E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.2162 | likely_benign | 0.2226 | benign | -0.976 | Destabilizing | 0.209 | N | 0.393 | neutral | None | None | None | None | N |
N/C | 0.3911 | ambiguous | 0.3974 | ambiguous | -0.056 | Destabilizing | 0.991 | D | 0.543 | neutral | None | None | None | None | N |
N/D | 0.1741 | likely_benign | 0.1736 | benign | -0.663 | Destabilizing | 0.003 | N | 0.179 | neutral | N | 0.471432295 | None | None | N |
N/E | 0.3942 | ambiguous | 0.4101 | ambiguous | -0.612 | Destabilizing | 0.209 | N | 0.375 | neutral | None | None | None | None | N |
N/F | 0.5102 | ambiguous | 0.5218 | ambiguous | -1.046 | Destabilizing | 0.901 | D | 0.551 | neutral | None | None | None | None | N |
N/G | 0.3546 | ambiguous | 0.367 | ambiguous | -1.25 | Destabilizing | 0.345 | N | 0.382 | neutral | None | None | None | None | N |
N/H | 0.1261 | likely_benign | 0.1312 | benign | -1.112 | Destabilizing | 0.007 | N | 0.269 | neutral | D | 0.536406494 | None | None | N |
N/I | 0.1737 | likely_benign | 0.1891 | benign | -0.298 | Destabilizing | 0.772 | D | 0.57 | neutral | N | 0.489844698 | None | None | N |
N/K | 0.3313 | likely_benign | 0.3472 | ambiguous | -0.149 | Destabilizing | 0.166 | N | 0.375 | neutral | N | 0.467466483 | None | None | N |
N/L | 0.2289 | likely_benign | 0.2341 | benign | -0.298 | Destabilizing | 0.561 | D | 0.49 | neutral | None | None | None | None | N |
N/M | 0.3364 | likely_benign | 0.3561 | ambiguous | 0.374 | Stabilizing | 0.965 | D | 0.534 | neutral | None | None | None | None | N |
N/P | 0.6645 | likely_pathogenic | 0.7113 | pathogenic | -0.497 | Destabilizing | 0.901 | D | 0.573 | neutral | None | None | None | None | N |
N/Q | 0.3672 | ambiguous | 0.3819 | ambiguous | -0.909 | Destabilizing | 0.561 | D | 0.433 | neutral | None | None | None | None | N |
N/R | 0.3375 | likely_benign | 0.3513 | ambiguous | -0.052 | Destabilizing | 0.004 | N | 0.285 | neutral | None | None | None | None | N |
N/S | 0.0824 | likely_benign | 0.0817 | benign | -0.762 | Destabilizing | 0.036 | N | 0.177 | neutral | N | 0.470738862 | None | None | N |
N/T | 0.1223 | likely_benign | 0.1316 | benign | -0.53 | Destabilizing | 0.005 | N | 0.144 | neutral | N | 0.406266096 | None | None | N |
N/V | 0.1762 | likely_benign | 0.1899 | benign | -0.497 | Destabilizing | 0.561 | D | 0.486 | neutral | None | None | None | None | N |
N/W | 0.7893 | likely_pathogenic | 0.8067 | pathogenic | -0.798 | Destabilizing | 0.991 | D | 0.568 | neutral | None | None | None | None | N |
N/Y | 0.1676 | likely_benign | 0.1703 | benign | -0.58 | Destabilizing | 0.629 | D | 0.558 | neutral | N | 0.510721402 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.