Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6551 | 19876;19877;19878 | chr2:178728173;178728172;178728171 | chr2:179592900;179592899;179592898 |
N2AB | 6234 | 18925;18926;18927 | chr2:178728173;178728172;178728171 | chr2:179592900;179592899;179592898 |
N2A | 5307 | 16144;16145;16146 | chr2:178728173;178728172;178728171 | chr2:179592900;179592899;179592898 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/C | None | None | 1.0 | D | 0.873 | 0.902 | 0.815021892448 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
Y/H | None | None | 1.0 | D | 0.775 | 0.884 | 0.681102614202 | gnomAD-4.0.0 | 1.59671E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 3.03361E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/A | 0.9943 | likely_pathogenic | 0.9963 | pathogenic | -2.828 | Highly Destabilizing | 1.0 | D | 0.854 | deleterious | None | None | None | None | N |
Y/C | 0.8977 | likely_pathogenic | 0.943 | pathogenic | -2.34 | Highly Destabilizing | 1.0 | D | 0.873 | deleterious | D | 0.660388335 | None | None | N |
Y/D | 0.9961 | likely_pathogenic | 0.9971 | pathogenic | -3.45 | Highly Destabilizing | 1.0 | D | 0.878 | deleterious | D | 0.660388335 | None | None | N |
Y/E | 0.9986 | likely_pathogenic | 0.9991 | pathogenic | -3.215 | Highly Destabilizing | 1.0 | D | 0.888 | deleterious | None | None | None | None | N |
Y/F | 0.1516 | likely_benign | 0.1629 | benign | -1.101 | Destabilizing | 0.999 | D | 0.663 | neutral | D | 0.567392109 | None | None | N |
Y/G | 0.9908 | likely_pathogenic | 0.9929 | pathogenic | -3.288 | Highly Destabilizing | 1.0 | D | 0.88 | deleterious | None | None | None | None | N |
Y/H | 0.9598 | likely_pathogenic | 0.9778 | pathogenic | -2.357 | Highly Destabilizing | 1.0 | D | 0.775 | deleterious | D | 0.660186531 | None | None | N |
Y/I | 0.8325 | likely_pathogenic | 0.8912 | pathogenic | -1.299 | Destabilizing | 1.0 | D | 0.835 | deleterious | None | None | None | None | N |
Y/K | 0.9981 | likely_pathogenic | 0.9988 | pathogenic | -2.326 | Highly Destabilizing | 1.0 | D | 0.885 | deleterious | None | None | None | None | N |
Y/L | 0.843 | likely_pathogenic | 0.8725 | pathogenic | -1.299 | Destabilizing | 0.999 | D | 0.766 | deleterious | None | None | None | None | N |
Y/M | 0.9643 | likely_pathogenic | 0.9759 | pathogenic | -1.415 | Destabilizing | 1.0 | D | 0.826 | deleterious | None | None | None | None | N |
Y/N | 0.9822 | likely_pathogenic | 0.987 | pathogenic | -3.243 | Highly Destabilizing | 1.0 | D | 0.881 | deleterious | D | 0.660388335 | None | None | N |
Y/P | 0.9989 | likely_pathogenic | 0.9991 | pathogenic | -1.826 | Destabilizing | 1.0 | D | 0.902 | deleterious | None | None | None | None | N |
Y/Q | 0.9976 | likely_pathogenic | 0.9987 | pathogenic | -2.865 | Highly Destabilizing | 1.0 | D | 0.837 | deleterious | None | None | None | None | N |
Y/R | 0.9932 | likely_pathogenic | 0.9954 | pathogenic | -2.332 | Highly Destabilizing | 1.0 | D | 0.886 | deleterious | None | None | None | None | N |
Y/S | 0.9857 | likely_pathogenic | 0.99 | pathogenic | -3.605 | Highly Destabilizing | 1.0 | D | 0.885 | deleterious | D | 0.660388335 | None | None | N |
Y/T | 0.9922 | likely_pathogenic | 0.995 | pathogenic | -3.224 | Highly Destabilizing | 1.0 | D | 0.887 | deleterious | None | None | None | None | N |
Y/V | 0.7985 | likely_pathogenic | 0.8571 | pathogenic | -1.826 | Destabilizing | 1.0 | D | 0.808 | deleterious | None | None | None | None | N |
Y/W | 0.782 | likely_pathogenic | 0.852 | pathogenic | -0.468 | Destabilizing | 1.0 | D | 0.77 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.