Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6555 | 19888;19889;19890 | chr2:178728161;178728160;178728159 | chr2:179592888;179592887;179592886 |
N2AB | 6238 | 18937;18938;18939 | chr2:178728161;178728160;178728159 | chr2:179592888;179592887;179592886 |
N2A | 5311 | 16156;16157;16158 | chr2:178728161;178728160;178728159 | chr2:179592888;179592887;179592886 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/L | rs753901455 | None | 0.015 | D | 0.282 | 0.319 | 0.4897983601 | gnomAD-4.0.0 | 2.33303E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.0647E-05 | 0 | 0 |
V/M | rs753901455 | -1.422 | 0.976 | N | 0.717 | 0.458 | 0.676562671139 | gnomAD-2.1.1 | 2.04E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 1.67414E-04 | None | 0 | 0 | 0 |
V/M | rs753901455 | -1.422 | 0.976 | N | 0.717 | 0.458 | 0.676562671139 | gnomAD-4.0.0 | 1.30375E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 2.22009E-04 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.3806 | ambiguous | 0.4258 | ambiguous | -2.282 | Highly Destabilizing | 0.134 | N | 0.355 | neutral | N | 0.368182136 | None | None | N |
V/C | 0.9505 | likely_pathogenic | 0.9528 | pathogenic | -2.18 | Highly Destabilizing | 0.999 | D | 0.803 | deleterious | None | None | None | None | N |
V/D | 0.9853 | likely_pathogenic | 0.9849 | pathogenic | -3.159 | Highly Destabilizing | 0.991 | D | 0.845 | deleterious | None | None | None | None | N |
V/E | 0.9716 | likely_pathogenic | 0.9721 | pathogenic | -2.974 | Highly Destabilizing | 0.988 | D | 0.787 | deleterious | N | 0.521912336 | None | None | N |
V/F | 0.5989 | likely_pathogenic | 0.5804 | pathogenic | -1.378 | Destabilizing | 0.982 | D | 0.809 | deleterious | None | None | None | None | N |
V/G | 0.6402 | likely_pathogenic | 0.6791 | pathogenic | -2.78 | Highly Destabilizing | 0.92 | D | 0.783 | deleterious | N | 0.496971226 | None | None | N |
V/H | 0.9927 | likely_pathogenic | 0.9926 | pathogenic | -2.389 | Highly Destabilizing | 0.999 | D | 0.839 | deleterious | None | None | None | None | N |
V/I | 0.1281 | likely_benign | 0.12 | benign | -0.896 | Destabilizing | 0.759 | D | 0.569 | neutral | None | None | None | None | N |
V/K | 0.9869 | likely_pathogenic | 0.9872 | pathogenic | -1.933 | Destabilizing | 0.991 | D | 0.793 | deleterious | None | None | None | None | N |
V/L | 0.44 | ambiguous | 0.4799 | ambiguous | -0.896 | Destabilizing | 0.015 | N | 0.282 | neutral | D | 0.532102326 | None | None | N |
V/M | 0.5158 | ambiguous | 0.5419 | ambiguous | -1.118 | Destabilizing | 0.976 | D | 0.717 | prob.delet. | N | 0.510302541 | None | None | N |
V/N | 0.9663 | likely_pathogenic | 0.9659 | pathogenic | -2.256 | Highly Destabilizing | 0.997 | D | 0.854 | deleterious | None | None | None | None | N |
V/P | 0.9903 | likely_pathogenic | 0.9904 | pathogenic | -1.332 | Destabilizing | 0.991 | D | 0.827 | deleterious | None | None | None | None | N |
V/Q | 0.9763 | likely_pathogenic | 0.977 | pathogenic | -2.174 | Highly Destabilizing | 0.997 | D | 0.831 | deleterious | None | None | None | None | N |
V/R | 0.9728 | likely_pathogenic | 0.9735 | pathogenic | -1.644 | Destabilizing | 0.991 | D | 0.847 | deleterious | None | None | None | None | N |
V/S | 0.8175 | likely_pathogenic | 0.8296 | pathogenic | -2.839 | Highly Destabilizing | 0.884 | D | 0.772 | deleterious | None | None | None | None | N |
V/T | 0.7195 | likely_pathogenic | 0.7605 | pathogenic | -2.521 | Highly Destabilizing | 0.939 | D | 0.685 | prob.neutral | None | None | None | None | N |
V/W | 0.9929 | likely_pathogenic | 0.9922 | pathogenic | -1.847 | Destabilizing | 0.999 | D | 0.833 | deleterious | None | None | None | None | N |
V/Y | 0.955 | likely_pathogenic | 0.9484 | pathogenic | -1.54 | Destabilizing | 0.997 | D | 0.814 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.