Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6556 | 19891;19892;19893 | chr2:178728158;178728157;178728156 | chr2:179592885;179592884;179592883 |
N2AB | 6239 | 18940;18941;18942 | chr2:178728158;178728157;178728156 | chr2:179592885;179592884;179592883 |
N2A | 5312 | 16159;16160;16161 | chr2:178728158;178728157;178728156 | chr2:179592885;179592884;179592883 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/L | rs2154306280 | None | 0.042 | N | 0.511 | 0.201 | 0.621426341079 | gnomAD-4.0.0 | 2.33534E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.06722E-05 | 0 | 0 |
S/P | None | None | 0.301 | N | 0.431 | 0.335 | 0.379881503574 | gnomAD-4.0.0 | 1.6052E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.45012E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.0832 | likely_benign | 0.0785 | benign | -0.595 | Destabilizing | None | N | 0.101 | neutral | N | 0.453097251 | None | None | N |
S/C | 0.1202 | likely_benign | 0.1175 | benign | -0.661 | Destabilizing | 0.667 | D | 0.468 | neutral | None | None | None | None | N |
S/D | 0.4303 | ambiguous | 0.4257 | ambiguous | -1.131 | Destabilizing | 0.055 | N | 0.329 | neutral | None | None | None | None | N |
S/E | 0.4368 | ambiguous | 0.4297 | ambiguous | -1.145 | Destabilizing | 0.002 | N | 0.125 | neutral | None | None | None | None | N |
S/F | 0.1796 | likely_benign | 0.1534 | benign | -0.979 | Destabilizing | 0.497 | N | 0.516 | neutral | None | None | None | None | N |
S/G | 0.1145 | likely_benign | 0.1174 | benign | -0.803 | Destabilizing | 0.055 | N | 0.36 | neutral | None | None | None | None | N |
S/H | 0.2583 | likely_benign | 0.2597 | benign | -1.375 | Destabilizing | 0.859 | D | 0.469 | neutral | None | None | None | None | N |
S/I | 0.173 | likely_benign | 0.1564 | benign | -0.151 | Destabilizing | 0.02 | N | 0.447 | neutral | None | None | None | None | N |
S/K | 0.4336 | ambiguous | 0.4278 | ambiguous | -0.77 | Destabilizing | 0.104 | N | 0.334 | neutral | None | None | None | None | N |
S/L | 0.1106 | likely_benign | 0.1056 | benign | -0.151 | Destabilizing | 0.042 | N | 0.511 | neutral | N | 0.484389337 | None | None | N |
S/M | 0.193 | likely_benign | 0.1799 | benign | 0.224 | Stabilizing | 0.497 | N | 0.459 | neutral | None | None | None | None | N |
S/N | 0.1392 | likely_benign | 0.1368 | benign | -0.87 | Destabilizing | 0.22 | N | 0.339 | neutral | None | None | None | None | N |
S/P | 0.8964 | likely_pathogenic | 0.8925 | pathogenic | -0.268 | Destabilizing | 0.301 | N | 0.431 | neutral | N | 0.498027048 | None | None | N |
S/Q | 0.3595 | ambiguous | 0.3505 | ambiguous | -1.153 | Destabilizing | 0.22 | N | 0.419 | neutral | None | None | None | None | N |
S/R | 0.3143 | likely_benign | 0.3054 | benign | -0.547 | Destabilizing | 0.22 | N | 0.451 | neutral | None | None | None | None | N |
S/T | 0.0699 | likely_benign | 0.0664 | benign | -0.774 | Destabilizing | None | N | 0.105 | neutral | N | 0.403801794 | None | None | N |
S/V | 0.1731 | likely_benign | 0.1544 | benign | -0.268 | Destabilizing | None | N | 0.269 | neutral | None | None | None | None | N |
S/W | 0.275 | likely_benign | 0.2466 | benign | -0.993 | Destabilizing | 0.958 | D | 0.527 | neutral | None | None | None | None | N |
S/Y | 0.1729 | likely_benign | 0.1543 | benign | -0.679 | Destabilizing | 0.667 | D | 0.515 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.