Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6557 | 19894;19895;19896 | chr2:178728155;178728154;178728153 | chr2:179592882;179592881;179592880 |
N2AB | 6240 | 18943;18944;18945 | chr2:178728155;178728154;178728153 | chr2:179592882;179592881;179592880 |
N2A | 5313 | 16162;16163;16164 | chr2:178728155;178728154;178728153 | chr2:179592882;179592881;179592880 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/S | rs764245160 | -0.839 | 0.999 | N | 0.589 | 0.544 | None | gnomAD-2.1.1 | 4.1E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 9.05E-06 | 0 |
N/S | rs764245160 | -0.839 | 0.999 | N | 0.589 | 0.544 | None | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
N/S | rs764245160 | -0.839 | 0.999 | N | 0.589 | 0.544 | None | gnomAD-4.0.0 | 6.45303E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.2061E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.9768 | likely_pathogenic | 0.9481 | pathogenic | -0.787 | Destabilizing | 1.0 | D | 0.755 | deleterious | None | None | None | None | I |
N/C | 0.9339 | likely_pathogenic | 0.9052 | pathogenic | -0.086 | Destabilizing | 1.0 | D | 0.701 | prob.neutral | None | None | None | None | I |
N/D | 0.9493 | likely_pathogenic | 0.9157 | pathogenic | -0.956 | Destabilizing | 0.999 | D | 0.623 | neutral | D | 0.542548491 | None | None | I |
N/E | 0.9958 | likely_pathogenic | 0.992 | pathogenic | -0.923 | Destabilizing | 0.999 | D | 0.719 | prob.delet. | None | None | None | None | I |
N/F | 0.997 | likely_pathogenic | 0.9937 | pathogenic | -0.943 | Destabilizing | 1.0 | D | 0.747 | deleterious | None | None | None | None | I |
N/G | 0.9433 | likely_pathogenic | 0.9097 | pathogenic | -1.031 | Destabilizing | 0.999 | D | 0.563 | neutral | None | None | None | None | I |
N/H | 0.9217 | likely_pathogenic | 0.8826 | pathogenic | -0.974 | Destabilizing | 1.0 | D | 0.741 | deleterious | D | 0.537232573 | None | None | I |
N/I | 0.9819 | likely_pathogenic | 0.9617 | pathogenic | -0.197 | Destabilizing | 1.0 | D | 0.729 | prob.delet. | D | 0.544069428 | None | None | I |
N/K | 0.9955 | likely_pathogenic | 0.9915 | pathogenic | -0.144 | Destabilizing | 1.0 | D | 0.737 | prob.delet. | D | 0.554665265 | None | None | I |
N/L | 0.9547 | likely_pathogenic | 0.9222 | pathogenic | -0.197 | Destabilizing | 1.0 | D | 0.735 | prob.delet. | None | None | None | None | I |
N/M | 0.9835 | likely_pathogenic | 0.9708 | pathogenic | 0.43 | Stabilizing | 1.0 | D | 0.739 | prob.delet. | None | None | None | None | I |
N/P | 0.988 | likely_pathogenic | 0.9769 | pathogenic | -0.367 | Destabilizing | 1.0 | D | 0.731 | prob.delet. | None | None | None | None | I |
N/Q | 0.9945 | likely_pathogenic | 0.9893 | pathogenic | -0.966 | Destabilizing | 1.0 | D | 0.736 | prob.delet. | None | None | None | None | I |
N/R | 0.9906 | likely_pathogenic | 0.9829 | pathogenic | 0.002 | Stabilizing | 1.0 | D | 0.746 | deleterious | None | None | None | None | I |
N/S | 0.469 | ambiguous | 0.3568 | ambiguous | -0.671 | Destabilizing | 0.999 | D | 0.589 | neutral | N | 0.508453122 | None | None | I |
N/T | 0.8585 | likely_pathogenic | 0.786 | pathogenic | -0.481 | Destabilizing | 0.999 | D | 0.709 | prob.delet. | D | 0.531445675 | None | None | I |
N/V | 0.971 | likely_pathogenic | 0.9398 | pathogenic | -0.367 | Destabilizing | 1.0 | D | 0.733 | prob.delet. | None | None | None | None | I |
N/W | 0.9991 | likely_pathogenic | 0.9978 | pathogenic | -0.741 | Destabilizing | 1.0 | D | 0.696 | prob.neutral | None | None | None | None | I |
N/Y | 0.9796 | likely_pathogenic | 0.9597 | pathogenic | -0.486 | Destabilizing | 1.0 | D | 0.748 | deleterious | D | 0.543815939 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.