Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6558 | 19897;19898;19899 | chr2:178728152;178728151;178728150 | chr2:179592879;179592878;179592877 |
N2AB | 6241 | 18946;18947;18948 | chr2:178728152;178728151;178728150 | chr2:179592879;179592878;179592877 |
N2A | 5314 | 16165;16166;16167 | chr2:178728152;178728151;178728150 | chr2:179592879;179592878;179592877 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/I | rs879223660 | -0.105 | 0.001 | N | 0.247 | 0.121 | None | gnomAD-2.1.1 | 4.11E-06 | None | None | None | None | I | None | 6.54E-05 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
V/I | rs879223660 | -0.105 | 0.001 | N | 0.247 | 0.121 | None | gnomAD-3.1.2 | 3.29E-05 | None | None | None | None | I | None | 1.20691E-04 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
V/I | rs879223660 | -0.105 | 0.001 | N | 0.247 | 0.121 | None | gnomAD-4.0.0 | 3.73447E-06 | None | None | None | None | I | None | 8.02826E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.0984 | likely_benign | 0.1021 | benign | -0.379 | Destabilizing | 0.003 | N | 0.107 | neutral | N | 0.455500051 | None | None | I |
V/C | 0.699 | likely_pathogenic | 0.725 | pathogenic | -0.869 | Destabilizing | 0.981 | D | 0.334 | neutral | None | None | None | None | I |
V/D | 0.1432 | likely_benign | 0.1504 | benign | -0.344 | Destabilizing | 0.002 | N | 0.317 | neutral | None | None | None | None | I |
V/E | 0.1589 | likely_benign | 0.1638 | benign | -0.461 | Destabilizing | 0.193 | N | 0.375 | neutral | N | 0.484934736 | None | None | I |
V/F | 0.1252 | likely_benign | 0.1298 | benign | -0.77 | Destabilizing | 0.69 | D | 0.333 | neutral | None | None | None | None | I |
V/G | 0.1424 | likely_benign | 0.1531 | benign | -0.422 | Destabilizing | 0.324 | N | 0.384 | neutral | N | 0.497674747 | None | None | I |
V/H | 0.3739 | ambiguous | 0.4083 | ambiguous | -0.051 | Destabilizing | 0.981 | D | 0.334 | neutral | None | None | None | None | I |
V/I | 0.0753 | likely_benign | 0.0748 | benign | -0.404 | Destabilizing | 0.001 | N | 0.247 | neutral | N | 0.50331264 | None | None | I |
V/K | 0.2035 | likely_benign | 0.2195 | benign | -0.399 | Destabilizing | 0.008 | N | 0.299 | neutral | None | None | None | None | I |
V/L | 0.1544 | likely_benign | 0.1623 | benign | -0.404 | Destabilizing | 0.033 | N | 0.339 | neutral | N | 0.517241943 | None | None | I |
V/M | 0.1155 | likely_benign | 0.1221 | benign | -0.598 | Destabilizing | 0.69 | D | 0.301 | neutral | None | None | None | None | I |
V/N | 0.1586 | likely_benign | 0.1725 | benign | -0.23 | Destabilizing | 0.69 | D | 0.365 | neutral | None | None | None | None | I |
V/P | 0.2931 | likely_benign | 0.329 | benign | -0.369 | Destabilizing | 0.818 | D | 0.378 | neutral | None | None | None | None | I |
V/Q | 0.2216 | likely_benign | 0.2365 | benign | -0.435 | Destabilizing | 0.69 | D | 0.381 | neutral | None | None | None | None | I |
V/R | 0.1858 | likely_benign | 0.1956 | benign | 0.033 | Stabilizing | 0.527 | D | 0.365 | neutral | None | None | None | None | I |
V/S | 0.1291 | likely_benign | 0.1373 | benign | -0.542 | Destabilizing | 0.241 | N | 0.376 | neutral | None | None | None | None | I |
V/T | 0.1274 | likely_benign | 0.1268 | benign | -0.57 | Destabilizing | 0.388 | N | 0.296 | neutral | None | None | None | None | I |
V/W | 0.6472 | likely_pathogenic | 0.6638 | pathogenic | -0.812 | Destabilizing | 0.981 | D | 0.461 | neutral | None | None | None | None | I |
V/Y | 0.3972 | ambiguous | 0.4169 | ambiguous | -0.552 | Destabilizing | 0.818 | D | 0.331 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.