Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6559 | 19900;19901;19902 | chr2:178728149;178728148;178728147 | chr2:179592876;179592875;179592874 |
N2AB | 6242 | 18949;18950;18951 | chr2:178728149;178728148;178728147 | chr2:179592876;179592875;179592874 |
N2A | 5315 | 16168;16169;16170 | chr2:178728149;178728148;178728147 | chr2:179592876;179592875;179592874 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/P | None | None | 0.056 | D | 0.441 | 0.475 | 0.416833835346 | gnomAD-4.0.0 | 1.61547E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 3.05998E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.6841 | likely_pathogenic | 0.7057 | pathogenic | -0.899 | Destabilizing | 0.999 | D | 0.595 | neutral | None | None | None | None | I |
A/D | 0.6552 | likely_pathogenic | 0.637 | pathogenic | -0.635 | Destabilizing | 0.975 | D | 0.643 | neutral | None | None | None | None | I |
A/E | 0.5615 | ambiguous | 0.5454 | ambiguous | -0.785 | Destabilizing | 0.967 | D | 0.537 | neutral | N | 0.511309137 | None | None | I |
A/F | 0.3712 | ambiguous | 0.4317 | ambiguous | -0.957 | Destabilizing | 0.073 | N | 0.545 | neutral | None | None | None | None | I |
A/G | 0.2871 | likely_benign | 0.3081 | benign | -0.29 | Destabilizing | 0.892 | D | 0.52 | neutral | D | 0.525018846 | None | None | I |
A/H | 0.7063 | likely_pathogenic | 0.7486 | pathogenic | -0.221 | Destabilizing | 0.999 | D | 0.667 | neutral | None | None | None | None | I |
A/I | 0.3403 | ambiguous | 0.3562 | ambiguous | -0.469 | Destabilizing | 0.975 | D | 0.566 | neutral | None | None | None | None | I |
A/K | 0.7883 | likely_pathogenic | 0.7946 | pathogenic | -0.624 | Destabilizing | 0.975 | D | 0.546 | neutral | None | None | None | None | I |
A/L | 0.2871 | likely_benign | 0.2966 | benign | -0.469 | Destabilizing | 0.845 | D | 0.551 | neutral | None | None | None | None | I |
A/M | 0.3503 | ambiguous | 0.3865 | ambiguous | -0.622 | Destabilizing | 0.999 | D | 0.591 | neutral | None | None | None | None | I |
A/N | 0.5895 | likely_pathogenic | 0.6055 | pathogenic | -0.338 | Destabilizing | 0.987 | D | 0.657 | neutral | None | None | None | None | I |
A/P | 0.8728 | likely_pathogenic | 0.8519 | pathogenic | -0.383 | Destabilizing | 0.056 | N | 0.441 | neutral | D | 0.538567652 | None | None | I |
A/Q | 0.6112 | likely_pathogenic | 0.6387 | pathogenic | -0.611 | Destabilizing | 0.987 | D | 0.581 | neutral | None | None | None | None | I |
A/R | 0.6639 | likely_pathogenic | 0.6756 | pathogenic | -0.152 | Destabilizing | 0.987 | D | 0.573 | neutral | None | None | None | None | I |
A/S | 0.144 | likely_benign | 0.1532 | benign | -0.518 | Destabilizing | 0.892 | D | 0.541 | neutral | D | 0.522043105 | None | None | I |
A/T | 0.1732 | likely_benign | 0.1822 | benign | -0.598 | Destabilizing | 0.892 | D | 0.529 | neutral | N | 0.521282636 | None | None | I |
A/V | 0.138 | likely_benign | 0.1484 | benign | -0.383 | Destabilizing | 0.892 | D | 0.537 | neutral | N | 0.487262946 | None | None | I |
A/W | 0.8537 | likely_pathogenic | 0.8667 | pathogenic | -1.043 | Destabilizing | 0.999 | D | 0.727 | prob.delet. | None | None | None | None | I |
A/Y | 0.6498 | likely_pathogenic | 0.6934 | pathogenic | -0.74 | Destabilizing | 0.95 | D | 0.654 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.