Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6561 | 19906;19907;19908 | chr2:178728143;178728142;178728141 | chr2:179592870;179592869;179592868 |
N2AB | 6244 | 18955;18956;18957 | chr2:178728143;178728142;178728141 | chr2:179592870;179592869;179592868 |
N2A | 5317 | 16174;16175;16176 | chr2:178728143;178728142;178728141 | chr2:179592870;179592869;179592868 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/N | rs938213426 | None | 0.001 | N | 0.127 | 0.122 | 0.270001397563 | gnomAD-4.0.0 | 2.06911E-06 | None | None | None | None | N | None | 0 | 2.2749E-05 | None | 0 | 0 | None | 0 | 0 | 9.04897E-07 | 0 | 1.67023E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.0961 | likely_benign | 0.1003 | benign | -0.174 | Destabilizing | 0.047 | N | 0.516 | neutral | N | 0.432220546 | None | None | N |
D/C | 0.3324 | likely_benign | 0.3795 | ambiguous | 0.2 | Stabilizing | 0.983 | D | 0.574 | neutral | None | None | None | None | N |
D/E | 0.1169 | likely_benign | 0.1183 | benign | -0.282 | Destabilizing | 0.183 | N | 0.395 | neutral | N | 0.412285204 | None | None | N |
D/F | 0.3208 | likely_benign | 0.325 | benign | -0.278 | Destabilizing | 0.836 | D | 0.589 | neutral | None | None | None | None | N |
D/G | 0.1065 | likely_benign | 0.1157 | benign | -0.347 | Destabilizing | 0.101 | N | 0.477 | neutral | N | 0.477974266 | None | None | N |
D/H | 0.1272 | likely_benign | 0.137 | benign | -0.159 | Destabilizing | 0.794 | D | 0.537 | neutral | N | 0.445459202 | None | None | N |
D/I | 0.1817 | likely_benign | 0.1847 | benign | 0.223 | Stabilizing | 0.01 | N | 0.418 | neutral | None | None | None | None | N |
D/K | 0.1695 | likely_benign | 0.1767 | benign | 0.437 | Stabilizing | 0.264 | N | 0.519 | neutral | None | None | None | None | N |
D/L | 0.2155 | likely_benign | 0.2201 | benign | 0.223 | Stabilizing | 0.129 | N | 0.646 | neutral | None | None | None | None | N |
D/M | 0.3631 | ambiguous | 0.3717 | ambiguous | 0.39 | Stabilizing | 0.836 | D | 0.582 | neutral | None | None | None | None | N |
D/N | 0.0675 | likely_benign | 0.0703 | benign | 0.249 | Stabilizing | 0.001 | N | 0.127 | neutral | N | 0.447998075 | None | None | N |
D/P | 0.6764 | likely_pathogenic | 0.702 | pathogenic | 0.112 | Stabilizing | 0.593 | D | 0.537 | neutral | None | None | None | None | N |
D/Q | 0.1701 | likely_benign | 0.1786 | benign | 0.251 | Stabilizing | 0.418 | N | 0.423 | neutral | None | None | None | None | N |
D/R | 0.1783 | likely_benign | 0.1863 | benign | 0.514 | Stabilizing | 0.418 | N | 0.575 | neutral | None | None | None | None | N |
D/S | 0.0635 | likely_benign | 0.0708 | benign | 0.137 | Stabilizing | 0.001 | N | 0.143 | neutral | None | None | None | None | N |
D/T | 0.107 | likely_benign | 0.1188 | benign | 0.267 | Stabilizing | 0.129 | N | 0.541 | neutral | None | None | None | None | N |
D/V | 0.1119 | likely_benign | 0.1159 | benign | 0.112 | Stabilizing | 0.101 | N | 0.64 | neutral | N | 0.44403505 | None | None | N |
D/W | 0.6712 | likely_pathogenic | 0.6767 | pathogenic | -0.204 | Destabilizing | 0.983 | D | 0.594 | neutral | None | None | None | None | N |
D/Y | 0.1178 | likely_benign | 0.1192 | benign | -0.047 | Destabilizing | 0.921 | D | 0.586 | neutral | N | 0.472299087 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.