Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6562 | 19909;19910;19911 | chr2:178728140;178728139;178728138 | chr2:179592867;179592866;179592865 |
N2AB | 6245 | 18958;18959;18960 | chr2:178728140;178728139;178728138 | chr2:179592867;179592866;179592865 |
N2A | 5318 | 16177;16178;16179 | chr2:178728140;178728139;178728138 | chr2:179592867;179592866;179592865 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/V | None | None | 0.012 | N | 0.454 | 0.129 | 0.376570364461 | gnomAD-4.0.0 | 4.87976E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 4.45395E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.0651 | likely_benign | 0.0556 | benign | -0.526 | Destabilizing | None | N | 0.195 | neutral | N | 0.460079151 | None | None | N |
D/C | 0.4178 | ambiguous | 0.4869 | ambiguous | -0.168 | Destabilizing | None | N | 0.303 | neutral | None | None | None | None | N |
D/E | 0.1759 | likely_benign | 0.1818 | benign | -0.602 | Destabilizing | None | N | 0.083 | neutral | D | 0.527016219 | None | None | N |
D/F | 0.4334 | ambiguous | 0.4464 | ambiguous | 0.006 | Stabilizing | 0.356 | N | 0.561 | neutral | None | None | None | None | N |
D/G | 0.1412 | likely_benign | 0.1495 | benign | -0.896 | Destabilizing | None | N | 0.114 | neutral | N | 0.51545974 | None | None | N |
D/H | 0.1927 | likely_benign | 0.2201 | benign | -0.25 | Destabilizing | 0.171 | N | 0.426 | neutral | N | 0.510851384 | None | None | N |
D/I | 0.24 | likely_benign | 0.2563 | benign | 0.456 | Stabilizing | 0.072 | N | 0.609 | neutral | None | None | None | None | N |
D/K | 0.2531 | likely_benign | 0.2748 | benign | -0.172 | Destabilizing | None | N | 0.145 | neutral | None | None | None | None | N |
D/L | 0.2889 | likely_benign | 0.2991 | benign | 0.456 | Stabilizing | 0.016 | N | 0.446 | neutral | None | None | None | None | N |
D/M | 0.4227 | ambiguous | 0.4518 | ambiguous | 0.841 | Stabilizing | 0.356 | N | 0.515 | neutral | None | None | None | None | N |
D/N | 0.0779 | likely_benign | 0.0964 | benign | -0.707 | Destabilizing | None | N | 0.107 | neutral | N | 0.489099825 | None | None | N |
D/P | 0.8756 | likely_pathogenic | 0.8919 | pathogenic | 0.154 | Stabilizing | 0.072 | N | 0.476 | neutral | None | None | None | None | N |
D/Q | 0.2561 | likely_benign | 0.2745 | benign | -0.558 | Destabilizing | 0.038 | N | 0.309 | neutral | None | None | None | None | N |
D/R | 0.2668 | likely_benign | 0.2801 | benign | 0.012 | Stabilizing | 0.038 | N | 0.543 | neutral | None | None | None | None | N |
D/S | 0.0729 | likely_benign | 0.0759 | benign | -0.968 | Destabilizing | 0.007 | N | 0.235 | neutral | None | None | None | None | N |
D/T | 0.1221 | likely_benign | 0.1237 | benign | -0.656 | Destabilizing | 0.016 | N | 0.403 | neutral | None | None | None | None | N |
D/V | 0.1318 | likely_benign | 0.1356 | benign | 0.154 | Stabilizing | 0.012 | N | 0.454 | neutral | N | 0.483052011 | None | None | N |
D/W | 0.8418 | likely_pathogenic | 0.8612 | pathogenic | 0.244 | Stabilizing | 0.864 | D | 0.509 | neutral | None | None | None | None | N |
D/Y | 0.1679 | likely_benign | 0.1787 | benign | 0.286 | Stabilizing | 0.295 | N | 0.555 | neutral | D | 0.533817484 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.