Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6564 | 19915;19916;19917 | chr2:178728134;178728133;178728132 | chr2:179592861;179592860;179592859 |
N2AB | 6247 | 18964;18965;18966 | chr2:178728134;178728133;178728132 | chr2:179592861;179592860;179592859 |
N2A | 5320 | 16183;16184;16185 | chr2:178728134;178728133;178728132 | chr2:179592861;179592860;179592859 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
C/F | None | None | 0.998 | N | 0.775 | 0.471 | 0.781870579539 | gnomAD-4.0.0 | 6.93134E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.20989E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
C/A | 0.5533 | ambiguous | 0.6095 | pathogenic | -1.919 | Destabilizing | 0.864 | D | 0.555 | neutral | None | None | None | None | N |
C/D | 0.9126 | likely_pathogenic | 0.9298 | pathogenic | -0.459 | Destabilizing | 0.991 | D | 0.8 | deleterious | None | None | None | None | N |
C/E | 0.9674 | likely_pathogenic | 0.9746 | pathogenic | -0.353 | Destabilizing | 0.991 | D | 0.801 | deleterious | None | None | None | None | N |
C/F | 0.5381 | ambiguous | 0.5591 | ambiguous | -1.291 | Destabilizing | 0.998 | D | 0.775 | deleterious | N | 0.502088745 | None | None | N |
C/G | 0.3765 | ambiguous | 0.4219 | ambiguous | -2.231 | Highly Destabilizing | 0.03 | N | 0.549 | neutral | N | 0.502088745 | None | None | N |
C/H | 0.8765 | likely_pathogenic | 0.9131 | pathogenic | -2.188 | Highly Destabilizing | 1.0 | D | 0.781 | deleterious | None | None | None | None | N |
C/I | 0.7519 | likely_pathogenic | 0.7692 | pathogenic | -1.112 | Destabilizing | 0.995 | D | 0.794 | deleterious | None | None | None | None | N |
C/K | 0.9788 | likely_pathogenic | 0.9862 | pathogenic | -1.027 | Destabilizing | 0.991 | D | 0.799 | deleterious | None | None | None | None | N |
C/L | 0.7728 | likely_pathogenic | 0.7974 | pathogenic | -1.112 | Destabilizing | 0.984 | D | 0.719 | prob.delet. | None | None | None | None | N |
C/M | 0.8431 | likely_pathogenic | 0.861 | pathogenic | -0.131 | Destabilizing | 1.0 | D | 0.747 | deleterious | None | None | None | None | N |
C/N | 0.8208 | likely_pathogenic | 0.8587 | pathogenic | -1.01 | Destabilizing | 0.991 | D | 0.798 | deleterious | None | None | None | None | N |
C/P | 0.9935 | likely_pathogenic | 0.9947 | pathogenic | -1.356 | Destabilizing | 0.995 | D | 0.817 | deleterious | None | None | None | None | N |
C/Q | 0.9175 | likely_pathogenic | 0.941 | pathogenic | -0.93 | Destabilizing | 0.995 | D | 0.807 | deleterious | None | None | None | None | N |
C/R | 0.8719 | likely_pathogenic | 0.9109 | pathogenic | -0.886 | Destabilizing | 0.994 | D | 0.816 | deleterious | N | 0.493263653 | None | None | N |
C/S | 0.2674 | likely_benign | 0.3292 | benign | -1.589 | Destabilizing | 0.476 | N | 0.569 | neutral | N | 0.477144759 | None | None | N |
C/T | 0.4765 | ambiguous | 0.53 | ambiguous | -1.297 | Destabilizing | 0.939 | D | 0.718 | prob.delet. | None | None | None | None | N |
C/V | 0.6006 | likely_pathogenic | 0.6258 | pathogenic | -1.356 | Destabilizing | 0.984 | D | 0.754 | deleterious | None | None | None | None | N |
C/W | 0.8773 | likely_pathogenic | 0.8956 | pathogenic | -1.253 | Destabilizing | 0.999 | D | 0.751 | deleterious | N | 0.504988807 | None | None | N |
C/Y | 0.7642 | likely_pathogenic | 0.8031 | pathogenic | -1.255 | Destabilizing | 0.998 | D | 0.775 | deleterious | N | 0.497075542 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.