Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6568 | 19927;19928;19929 | chr2:178728122;178728121;178728120 | chr2:179592849;179592848;179592847 |
N2AB | 6251 | 18976;18977;18978 | chr2:178728122;178728121;178728120 | chr2:179592849;179592848;179592847 |
N2A | 5324 | 16195;16196;16197 | chr2:178728122;178728121;178728120 | chr2:179592849;179592848;179592847 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/S | rs1297518586 | None | 1.0 | D | 0.912 | 0.642 | 0.860891292117 | gnomAD-4.0.0 | 1.69465E-06 | None | None | None | None | N | None | 0 | 2.57559E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.9177 | likely_pathogenic | 0.9205 | pathogenic | -2.929 | Highly Destabilizing | 0.998 | D | 0.755 | deleterious | None | None | None | None | N |
L/C | 0.9089 | likely_pathogenic | 0.9187 | pathogenic | -2.457 | Highly Destabilizing | 1.0 | D | 0.875 | deleterious | None | None | None | None | N |
L/D | 0.9991 | likely_pathogenic | 0.9993 | pathogenic | -3.615 | Highly Destabilizing | 1.0 | D | 0.919 | deleterious | None | None | None | None | N |
L/E | 0.9937 | likely_pathogenic | 0.9951 | pathogenic | -3.372 | Highly Destabilizing | 1.0 | D | 0.907 | deleterious | None | None | None | None | N |
L/F | 0.5286 | ambiguous | 0.622 | pathogenic | -1.831 | Destabilizing | 0.999 | D | 0.831 | deleterious | D | 0.52523852 | None | None | N |
L/G | 0.9885 | likely_pathogenic | 0.9898 | pathogenic | -3.502 | Highly Destabilizing | 1.0 | D | 0.908 | deleterious | None | None | None | None | N |
L/H | 0.9806 | likely_pathogenic | 0.9863 | pathogenic | -3.001 | Highly Destabilizing | 1.0 | D | 0.913 | deleterious | None | None | None | None | N |
L/I | 0.1328 | likely_benign | 0.166 | benign | -1.247 | Destabilizing | 0.884 | D | 0.345 | neutral | N | 0.494457606 | None | None | N |
L/K | 0.9917 | likely_pathogenic | 0.9934 | pathogenic | -2.413 | Highly Destabilizing | 1.0 | D | 0.911 | deleterious | None | None | None | None | N |
L/M | 0.3358 | likely_benign | 0.3641 | ambiguous | -1.267 | Destabilizing | 1.0 | D | 0.797 | deleterious | None | None | None | None | N |
L/N | 0.9943 | likely_pathogenic | 0.9955 | pathogenic | -2.877 | Highly Destabilizing | 1.0 | D | 0.92 | deleterious | None | None | None | None | N |
L/P | 0.9942 | likely_pathogenic | 0.9956 | pathogenic | -1.792 | Destabilizing | 1.0 | D | 0.917 | deleterious | None | None | None | None | N |
L/Q | 0.9707 | likely_pathogenic | 0.9772 | pathogenic | -2.711 | Highly Destabilizing | 1.0 | D | 0.924 | deleterious | None | None | None | None | N |
L/R | 0.9775 | likely_pathogenic | 0.9822 | pathogenic | -2.084 | Highly Destabilizing | 1.0 | D | 0.923 | deleterious | None | None | None | None | N |
L/S | 0.9836 | likely_pathogenic | 0.9866 | pathogenic | -3.548 | Highly Destabilizing | 1.0 | D | 0.912 | deleterious | D | 0.556131112 | None | None | N |
L/T | 0.942 | likely_pathogenic | 0.9522 | pathogenic | -3.153 | Highly Destabilizing | 1.0 | D | 0.829 | deleterious | None | None | None | None | N |
L/V | 0.1509 | likely_benign | 0.1859 | benign | -1.792 | Destabilizing | 0.981 | D | 0.643 | neutral | N | 0.468814798 | None | None | N |
L/W | 0.936 | likely_pathogenic | 0.9559 | pathogenic | -2.297 | Highly Destabilizing | 1.0 | D | 0.907 | deleterious | None | None | None | None | N |
L/Y | 0.9566 | likely_pathogenic | 0.9674 | pathogenic | -2.056 | Highly Destabilizing | 1.0 | D | 0.881 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.