Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6574 | 19945;19946;19947 | chr2:178727858;178727857;178727856 | chr2:179592585;179592584;179592583 |
N2AB | 6257 | 18994;18995;18996 | chr2:178727858;178727857;178727856 | chr2:179592585;179592584;179592583 |
N2A | 5330 | 16213;16214;16215 | chr2:178727858;178727857;178727856 | chr2:179592585;179592584;179592583 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/Q | None | None | 1.0 | D | 0.892 | 0.653 | 0.83602636732 | gnomAD-4.0.0 | 1.67444E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.97115E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.3658 | ambiguous | 0.4189 | ambiguous | -1.805 | Destabilizing | 0.995 | D | 0.815 | deleterious | D | 0.628156733 | None | None | N |
P/C | 0.9482 | likely_pathogenic | 0.9696 | pathogenic | -1.663 | Destabilizing | 1.0 | D | 0.888 | deleterious | None | None | None | None | N |
P/D | 0.9966 | likely_pathogenic | 0.9982 | pathogenic | -1.487 | Destabilizing | 0.998 | D | 0.885 | deleterious | None | None | None | None | N |
P/E | 0.9884 | likely_pathogenic | 0.9937 | pathogenic | -1.384 | Destabilizing | 0.999 | D | 0.878 | deleterious | None | None | None | None | N |
P/F | 0.993 | likely_pathogenic | 0.9965 | pathogenic | -1.266 | Destabilizing | 1.0 | D | 0.911 | deleterious | None | None | None | None | N |
P/G | 0.9416 | likely_pathogenic | 0.9626 | pathogenic | -2.227 | Highly Destabilizing | 0.999 | D | 0.863 | deleterious | None | None | None | None | N |
P/H | 0.9853 | likely_pathogenic | 0.9928 | pathogenic | -1.748 | Destabilizing | 1.0 | D | 0.889 | deleterious | None | None | None | None | N |
P/I | 0.9054 | likely_pathogenic | 0.9517 | pathogenic | -0.695 | Destabilizing | 1.0 | D | 0.903 | deleterious | None | None | None | None | N |
P/K | 0.9922 | likely_pathogenic | 0.9959 | pathogenic | -1.307 | Destabilizing | 1.0 | D | 0.882 | deleterious | None | None | None | None | N |
P/L | 0.7854 | likely_pathogenic | 0.8738 | pathogenic | -0.695 | Destabilizing | 1.0 | D | 0.894 | deleterious | D | 0.628560341 | None | None | N |
P/M | 0.9656 | likely_pathogenic | 0.9823 | pathogenic | -0.829 | Destabilizing | 1.0 | D | 0.892 | deleterious | None | None | None | None | N |
P/N | 0.9939 | likely_pathogenic | 0.997 | pathogenic | -1.315 | Destabilizing | 1.0 | D | 0.901 | deleterious | None | None | None | None | N |
P/Q | 0.9746 | likely_pathogenic | 0.9873 | pathogenic | -1.345 | Destabilizing | 1.0 | D | 0.892 | deleterious | D | 0.628762145 | None | None | N |
P/R | 0.9728 | likely_pathogenic | 0.9855 | pathogenic | -1.015 | Destabilizing | 1.0 | D | 0.905 | deleterious | D | 0.628762145 | None | None | N |
P/S | 0.8779 | likely_pathogenic | 0.9241 | pathogenic | -2.039 | Highly Destabilizing | 0.992 | D | 0.731 | prob.delet. | D | 0.628358537 | None | None | N |
P/T | 0.8511 | likely_pathogenic | 0.9148 | pathogenic | -1.799 | Destabilizing | 0.999 | D | 0.871 | deleterious | D | 0.628560341 | None | None | N |
P/V | 0.7691 | likely_pathogenic | 0.8581 | pathogenic | -1.033 | Destabilizing | 1.0 | D | 0.895 | deleterious | None | None | None | None | N |
P/W | 0.9985 | likely_pathogenic | 0.9993 | pathogenic | -1.491 | Destabilizing | 1.0 | D | 0.852 | deleterious | None | None | None | None | N |
P/Y | 0.9956 | likely_pathogenic | 0.9977 | pathogenic | -1.16 | Destabilizing | 1.0 | D | 0.911 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.