Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6579 | 19960;19961;19962 | chr2:178727843;178727842;178727841 | chr2:179592570;179592569;179592568 |
N2AB | 6262 | 19009;19010;19011 | chr2:178727843;178727842;178727841 | chr2:179592570;179592569;179592568 |
N2A | 5335 | 16228;16229;16230 | chr2:178727843;178727842;178727841 | chr2:179592570;179592569;179592568 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/N | rs1578112424 | None | 0.952 | N | 0.303 | 0.133 | 0.107399877778 | gnomAD-4.0.0 | 3.27721E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.85566E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.4376 | ambiguous | 0.4759 | ambiguous | -0.42 | Destabilizing | 0.843 | D | 0.323 | neutral | None | None | None | None | N |
K/C | 0.8349 | likely_pathogenic | 0.8468 | pathogenic | -0.462 | Destabilizing | 0.999 | D | 0.355 | neutral | None | None | None | None | N |
K/D | 0.7159 | likely_pathogenic | 0.7389 | pathogenic | 0.284 | Stabilizing | 0.867 | D | 0.321 | neutral | None | None | None | None | N |
K/E | 0.2085 | likely_benign | 0.2253 | benign | 0.38 | Stabilizing | 0.038 | N | 0.119 | neutral | N | 0.492667919 | None | None | N |
K/F | 0.8027 | likely_pathogenic | 0.8146 | pathogenic | -0.211 | Destabilizing | 0.974 | D | 0.367 | neutral | None | None | None | None | N |
K/G | 0.6358 | likely_pathogenic | 0.6981 | pathogenic | -0.744 | Destabilizing | 0.963 | D | 0.361 | neutral | None | None | None | None | N |
K/H | 0.4277 | ambiguous | 0.4582 | ambiguous | -0.97 | Destabilizing | 0.992 | D | 0.313 | neutral | None | None | None | None | N |
K/I | 0.3919 | ambiguous | 0.3861 | ambiguous | 0.399 | Stabilizing | 0.126 | N | 0.378 | neutral | N | 0.45466861 | None | None | N |
K/L | 0.3884 | ambiguous | 0.4042 | ambiguous | 0.399 | Stabilizing | 0.161 | N | 0.35 | neutral | None | None | None | None | N |
K/M | 0.2391 | likely_benign | 0.244 | benign | 0.112 | Stabilizing | 0.917 | D | 0.315 | neutral | None | None | None | None | N |
K/N | 0.5285 | ambiguous | 0.5481 | ambiguous | -0.144 | Destabilizing | 0.952 | D | 0.303 | neutral | N | 0.451119757 | None | None | N |
K/P | 0.5318 | ambiguous | 0.579 | pathogenic | 0.156 | Stabilizing | 0.017 | N | 0.097 | neutral | None | None | None | None | N |
K/Q | 0.1541 | likely_benign | 0.1652 | benign | -0.188 | Destabilizing | 0.543 | D | 0.321 | neutral | N | 0.489398328 | None | None | N |
K/R | 0.1116 | likely_benign | 0.116 | benign | -0.311 | Destabilizing | 0.645 | D | 0.276 | neutral | N | 0.462385085 | None | None | N |
K/S | 0.5307 | ambiguous | 0.5702 | pathogenic | -0.8 | Destabilizing | 0.929 | D | 0.251 | neutral | None | None | None | None | N |
K/T | 0.2446 | likely_benign | 0.2582 | benign | -0.503 | Destabilizing | 0.746 | D | 0.319 | neutral | N | 0.461923725 | None | None | N |
K/V | 0.397 | ambiguous | 0.4013 | ambiguous | 0.156 | Stabilizing | 0.007 | N | 0.254 | neutral | None | None | None | None | N |
K/W | 0.8601 | likely_pathogenic | 0.876 | pathogenic | -0.115 | Destabilizing | 0.999 | D | 0.457 | neutral | None | None | None | None | N |
K/Y | 0.6939 | likely_pathogenic | 0.7149 | pathogenic | 0.183 | Stabilizing | 0.929 | D | 0.362 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.