Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6583 | 19972;19973;19974 | chr2:178727831;178727830;178727829 | chr2:179592558;179592557;179592556 |
N2AB | 6266 | 19021;19022;19023 | chr2:178727831;178727830;178727829 | chr2:179592558;179592557;179592556 |
N2A | 5339 | 16240;16241;16242 | chr2:178727831;178727830;178727829 | chr2:179592558;179592557;179592556 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/R | rs1370326075 | None | 0.135 | N | 0.205 | 0.219 | 0.218112801441 | gnomAD-4.0.0 | 1.61836E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.78458E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/A | 0.3753 | ambiguous | 0.4419 | ambiguous | -0.632 | Destabilizing | 0.993 | D | 0.483 | neutral | None | None | None | None | N |
Q/C | 0.7544 | likely_pathogenic | 0.8318 | pathogenic | -0.008 | Destabilizing | 1.0 | D | 0.685 | prob.neutral | None | None | None | None | N |
Q/D | 0.6646 | likely_pathogenic | 0.7168 | pathogenic | -0.123 | Destabilizing | 0.993 | D | 0.402 | neutral | None | None | None | None | N |
Q/E | 0.1122 | likely_benign | 0.1175 | benign | -0.009 | Destabilizing | 0.953 | D | 0.397 | neutral | N | 0.504063754 | None | None | N |
Q/F | 0.768 | likely_pathogenic | 0.8142 | pathogenic | -0.293 | Destabilizing | 0.999 | D | 0.68 | prob.neutral | None | None | None | None | N |
Q/G | 0.4407 | ambiguous | 0.5247 | ambiguous | -0.99 | Destabilizing | 0.993 | D | 0.508 | neutral | None | None | None | None | N |
Q/H | 0.3831 | ambiguous | 0.4564 | ambiguous | -0.626 | Destabilizing | 0.999 | D | 0.436 | neutral | N | 0.504317244 | None | None | N |
Q/I | 0.3719 | ambiguous | 0.3926 | ambiguous | 0.286 | Stabilizing | 0.999 | D | 0.67 | neutral | None | None | None | None | N |
Q/K | 0.1276 | likely_benign | 0.1465 | benign | -0.158 | Destabilizing | 0.911 | D | 0.458 | neutral | N | 0.501869845 | None | None | N |
Q/L | 0.1611 | likely_benign | 0.1779 | benign | 0.286 | Stabilizing | 0.99 | D | 0.508 | neutral | N | 0.520452819 | None | None | N |
Q/M | 0.4212 | ambiguous | 0.4651 | ambiguous | 0.517 | Stabilizing | 0.999 | D | 0.44 | neutral | None | None | None | None | N |
Q/N | 0.5555 | ambiguous | 0.5905 | pathogenic | -0.733 | Destabilizing | 0.993 | D | 0.411 | neutral | None | None | None | None | N |
Q/P | 0.4496 | ambiguous | 0.5949 | pathogenic | 0.011 | Stabilizing | 0.999 | D | 0.562 | neutral | N | 0.511065193 | None | None | N |
Q/R | 0.139 | likely_benign | 0.1709 | benign | -0.128 | Destabilizing | 0.135 | N | 0.205 | neutral | N | 0.515145787 | None | None | N |
Q/S | 0.4696 | ambiguous | 0.5306 | ambiguous | -0.878 | Destabilizing | 0.993 | D | 0.387 | neutral | None | None | None | None | N |
Q/T | 0.3347 | likely_benign | 0.3849 | ambiguous | -0.556 | Destabilizing | 0.993 | D | 0.471 | neutral | None | None | None | None | N |
Q/V | 0.2621 | likely_benign | 0.2879 | benign | 0.011 | Stabilizing | 0.998 | D | 0.541 | neutral | None | None | None | None | N |
Q/W | 0.6581 | likely_pathogenic | 0.7584 | pathogenic | -0.161 | Destabilizing | 1.0 | D | 0.681 | prob.neutral | None | None | None | None | N |
Q/Y | 0.6006 | likely_pathogenic | 0.6783 | pathogenic | 0.065 | Stabilizing | 0.999 | D | 0.558 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.