Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6588 | 19987;19988;19989 | chr2:178727816;178727815;178727814 | chr2:179592543;179592542;179592541 |
N2AB | 6271 | 19036;19037;19038 | chr2:178727816;178727815;178727814 | chr2:179592543;179592542;179592541 |
N2A | 5344 | 16255;16256;16257 | chr2:178727816;178727815;178727814 | chr2:179592543;179592542;179592541 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/H | None | None | 0.988 | N | 0.593 | 0.398 | 0.39843156188 | gnomAD-4.0.0 | 6.85357E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.00526E-06 | 0 | 0 |
D/N | None | None | 0.061 | N | 0.301 | 0.224 | 0.233785782151 | gnomAD-4.0.0 | 6.85357E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.00526E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.1764 | likely_benign | 0.147 | benign | -0.172 | Destabilizing | 0.92 | D | 0.531 | neutral | N | 0.494463871 | None | None | N |
D/C | 0.7033 | likely_pathogenic | 0.651 | pathogenic | 0.182 | Stabilizing | 0.999 | D | 0.634 | neutral | None | None | None | None | N |
D/E | 0.1997 | likely_benign | 0.1759 | benign | -0.178 | Destabilizing | 0.92 | D | 0.421 | neutral | N | 0.476550113 | None | None | N |
D/F | 0.5842 | likely_pathogenic | 0.5453 | ambiguous | -0.265 | Destabilizing | 0.997 | D | 0.615 | neutral | None | None | None | None | N |
D/G | 0.1084 | likely_benign | 0.0933 | benign | -0.321 | Destabilizing | 0.015 | N | 0.399 | neutral | N | 0.310005333 | None | None | N |
D/H | 0.3015 | likely_benign | 0.2494 | benign | -0.035 | Destabilizing | 0.988 | D | 0.593 | neutral | N | 0.489949198 | None | None | N |
D/I | 0.5203 | ambiguous | 0.4383 | ambiguous | 0.159 | Stabilizing | 0.997 | D | 0.606 | neutral | None | None | None | None | N |
D/K | 0.4345 | ambiguous | 0.3496 | ambiguous | 0.509 | Stabilizing | 0.939 | D | 0.565 | neutral | None | None | None | None | N |
D/L | 0.4384 | ambiguous | 0.371 | ambiguous | 0.159 | Stabilizing | 0.991 | D | 0.6 | neutral | None | None | None | None | N |
D/M | 0.6894 | likely_pathogenic | 0.6381 | pathogenic | 0.284 | Stabilizing | 0.999 | D | 0.617 | neutral | None | None | None | None | N |
D/N | 0.0958 | likely_benign | 0.0802 | benign | 0.294 | Stabilizing | 0.061 | N | 0.301 | neutral | N | 0.437378437 | None | None | N |
D/P | 0.7825 | likely_pathogenic | 0.7431 | pathogenic | 0.069 | Stabilizing | 0.997 | D | 0.573 | neutral | None | None | None | None | N |
D/Q | 0.383 | ambiguous | 0.3209 | benign | 0.303 | Stabilizing | 0.991 | D | 0.439 | neutral | None | None | None | None | N |
D/R | 0.4226 | ambiguous | 0.3569 | ambiguous | 0.586 | Stabilizing | 0.991 | D | 0.579 | neutral | None | None | None | None | N |
D/S | 0.1289 | likely_benign | 0.111 | benign | 0.196 | Stabilizing | 0.863 | D | 0.395 | neutral | None | None | None | None | N |
D/T | 0.3192 | likely_benign | 0.2661 | benign | 0.313 | Stabilizing | 0.939 | D | 0.569 | neutral | None | None | None | None | N |
D/V | 0.3233 | likely_benign | 0.2665 | benign | 0.069 | Stabilizing | 0.996 | D | 0.605 | neutral | N | 0.489949198 | None | None | N |
D/W | 0.8931 | likely_pathogenic | 0.8833 | pathogenic | -0.189 | Destabilizing | 0.999 | D | 0.633 | neutral | None | None | None | None | N |
D/Y | 0.2416 | likely_benign | 0.2211 | benign | -0.037 | Destabilizing | 0.996 | D | 0.617 | neutral | N | 0.490202688 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.