Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6597 | 20014;20015;20016 | chr2:178727789;178727788;178727787 | chr2:179592516;179592515;179592514 |
N2AB | 6280 | 19063;19064;19065 | chr2:178727789;178727788;178727787 | chr2:179592516;179592515;179592514 |
N2A | 5353 | 16282;16283;16284 | chr2:178727789;178727788;178727787 | chr2:179592516;179592515;179592514 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/I | None | None | 0.64 | N | 0.714 | 0.141 | 0.39843156188 | gnomAD-4.0.0 | 6.00161E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 6.56251E-06 | 0 | 0 |
L/P | rs745676008 | -1.095 | 0.995 | N | 0.83 | 0.572 | 0.690133245405 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.9E-06 | 0 |
L/P | rs745676008 | -1.095 | 0.995 | N | 0.83 | 0.572 | 0.690133245405 | gnomAD-4.0.0 | 2.6012E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.41923E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.6269 | likely_pathogenic | 0.5724 | pathogenic | -2.31 | Highly Destabilizing | 0.851 | D | 0.737 | prob.delet. | None | None | None | None | N |
L/C | 0.6778 | likely_pathogenic | 0.6344 | pathogenic | -1.712 | Destabilizing | 0.999 | D | 0.757 | deleterious | None | None | None | None | N |
L/D | 0.9912 | likely_pathogenic | 0.9881 | pathogenic | -1.775 | Destabilizing | 0.996 | D | 0.842 | deleterious | None | None | None | None | N |
L/E | 0.94 | likely_pathogenic | 0.9217 | pathogenic | -1.517 | Destabilizing | 0.988 | D | 0.835 | deleterious | None | None | None | None | N |
L/F | 0.2033 | likely_benign | 0.1987 | benign | -1.302 | Destabilizing | 0.034 | N | 0.313 | neutral | None | None | None | None | N |
L/G | 0.8987 | likely_pathogenic | 0.8732 | pathogenic | -2.882 | Highly Destabilizing | 0.988 | D | 0.813 | deleterious | None | None | None | None | N |
L/H | 0.7799 | likely_pathogenic | 0.7437 | pathogenic | -2.299 | Highly Destabilizing | 0.999 | D | 0.813 | deleterious | None | None | None | None | N |
L/I | 0.1075 | likely_benign | 0.114 | benign | -0.648 | Destabilizing | 0.64 | D | 0.714 | prob.delet. | N | 0.365358049 | None | None | N |
L/K | 0.9137 | likely_pathogenic | 0.9015 | pathogenic | -1.456 | Destabilizing | 0.988 | D | 0.828 | deleterious | None | None | None | None | N |
L/M | 0.1803 | likely_benign | 0.1758 | benign | -0.774 | Destabilizing | 0.988 | D | 0.762 | deleterious | None | None | None | None | N |
L/N | 0.944 | likely_pathogenic | 0.9248 | pathogenic | -1.792 | Destabilizing | 0.996 | D | 0.829 | deleterious | None | None | None | None | N |
L/P | 0.8883 | likely_pathogenic | 0.8794 | pathogenic | -1.184 | Destabilizing | 0.995 | D | 0.83 | deleterious | N | 0.457465707 | None | None | N |
L/Q | 0.7201 | likely_pathogenic | 0.6878 | pathogenic | -1.552 | Destabilizing | 0.995 | D | 0.803 | deleterious | N | 0.482246722 | None | None | N |
L/R | 0.8135 | likely_pathogenic | 0.7855 | pathogenic | -1.432 | Destabilizing | 0.995 | D | 0.817 | deleterious | N | 0.482246722 | None | None | N |
L/S | 0.8253 | likely_pathogenic | 0.7692 | pathogenic | -2.652 | Highly Destabilizing | 0.988 | D | 0.815 | deleterious | None | None | None | None | N |
L/T | 0.6516 | likely_pathogenic | 0.5963 | pathogenic | -2.227 | Highly Destabilizing | 0.919 | D | 0.809 | deleterious | None | None | None | None | N |
L/V | 0.098 | likely_benign | 0.1042 | benign | -1.184 | Destabilizing | 0.026 | N | 0.319 | neutral | N | 0.333373343 | None | None | N |
L/W | 0.5897 | likely_pathogenic | 0.572 | pathogenic | -1.545 | Destabilizing | 0.999 | D | 0.789 | deleterious | None | None | None | None | N |
L/Y | 0.707 | likely_pathogenic | 0.6708 | pathogenic | -1.279 | Destabilizing | 0.952 | D | 0.829 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.