Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6599 | 20020;20021;20022 | chr2:178727783;178727782;178727781 | chr2:179592510;179592509;179592508 |
N2AB | 6282 | 19069;19070;19071 | chr2:178727783;178727782;178727781 | chr2:179592510;179592509;179592508 |
N2A | 5355 | 16288;16289;16290 | chr2:178727783;178727782;178727781 | chr2:179592510;179592509;179592508 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/E | None | None | 1.0 | D | 0.811 | 0.723 | 0.705268275649 | gnomAD-4.0.0 | 2.40064E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.625E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/A | 0.7838 | likely_pathogenic | 0.8648 | pathogenic | -0.266 | Destabilizing | 1.0 | D | 0.773 | deleterious | D | 0.573448032 | None | None | I |
G/C | 0.974 | likely_pathogenic | 0.989 | pathogenic | -0.808 | Destabilizing | 1.0 | D | 0.7 | prob.neutral | None | None | None | None | I |
G/D | 0.9826 | likely_pathogenic | 0.9923 | pathogenic | -0.505 | Destabilizing | 1.0 | D | 0.827 | deleterious | None | None | None | None | I |
G/E | 0.9878 | likely_pathogenic | 0.995 | pathogenic | -0.621 | Destabilizing | 1.0 | D | 0.811 | deleterious | D | 0.627149506 | None | None | I |
G/F | 0.9966 | likely_pathogenic | 0.998 | pathogenic | -0.817 | Destabilizing | 1.0 | D | 0.75 | deleterious | None | None | None | None | I |
G/H | 0.9983 | likely_pathogenic | 0.9993 | pathogenic | -0.581 | Destabilizing | 1.0 | D | 0.68 | prob.neutral | None | None | None | None | I |
G/I | 0.9894 | likely_pathogenic | 0.9947 | pathogenic | -0.232 | Destabilizing | 1.0 | D | 0.767 | deleterious | None | None | None | None | I |
G/K | 0.9972 | likely_pathogenic | 0.9989 | pathogenic | -0.878 | Destabilizing | 1.0 | D | 0.811 | deleterious | None | None | None | None | I |
G/L | 0.9937 | likely_pathogenic | 0.9966 | pathogenic | -0.232 | Destabilizing | 1.0 | D | 0.784 | deleterious | None | None | None | None | I |
G/M | 0.9954 | likely_pathogenic | 0.9976 | pathogenic | -0.464 | Destabilizing | 1.0 | D | 0.691 | prob.neutral | None | None | None | None | I |
G/N | 0.9924 | likely_pathogenic | 0.9966 | pathogenic | -0.543 | Destabilizing | 1.0 | D | 0.831 | deleterious | None | None | None | None | I |
G/P | 0.9985 | likely_pathogenic | 0.9993 | pathogenic | -0.207 | Destabilizing | 1.0 | D | 0.799 | deleterious | None | None | None | None | I |
G/Q | 0.9965 | likely_pathogenic | 0.9986 | pathogenic | -0.742 | Destabilizing | 1.0 | D | 0.795 | deleterious | None | None | None | None | I |
G/R | 0.9931 | likely_pathogenic | 0.9972 | pathogenic | -0.516 | Destabilizing | 1.0 | D | 0.801 | deleterious | D | 0.646801344 | None | None | I |
G/S | 0.887 | likely_pathogenic | 0.9501 | pathogenic | -0.714 | Destabilizing | 1.0 | D | 0.827 | deleterious | None | None | None | None | I |
G/T | 0.9771 | likely_pathogenic | 0.9899 | pathogenic | -0.748 | Destabilizing | 1.0 | D | 0.808 | deleterious | None | None | None | None | I |
G/V | 0.9664 | likely_pathogenic | 0.9839 | pathogenic | -0.207 | Destabilizing | 1.0 | D | 0.783 | deleterious | D | 0.630781983 | None | None | I |
G/W | 0.9933 | likely_pathogenic | 0.9969 | pathogenic | -1.061 | Destabilizing | 1.0 | D | 0.695 | prob.neutral | None | None | None | None | I |
G/Y | 0.9942 | likely_pathogenic | 0.9974 | pathogenic | -0.669 | Destabilizing | 1.0 | D | 0.737 | prob.delet. | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.