Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6614 | 20065;20066;20067 | chr2:178727738;178727737;178727736 | chr2:179592465;179592464;179592463 |
N2AB | 6297 | 19114;19115;19116 | chr2:178727738;178727737;178727736 | chr2:179592465;179592464;179592463 |
N2A | 5370 | 16333;16334;16335 | chr2:178727738;178727737;178727736 | chr2:179592465;179592464;179592463 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/I | rs758885175 | -0.538 | 0.884 | N | 0.364 | 0.274 | 0.581442141994 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 0 | 0 |
L/I | rs758885175 | -0.538 | 0.884 | N | 0.364 | 0.274 | 0.581442141994 | gnomAD-4.0.0 | 1.59225E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43328E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.5823 | likely_pathogenic | 0.6104 | pathogenic | -2.117 | Highly Destabilizing | 0.998 | D | 0.635 | neutral | None | None | None | None | N |
L/C | 0.8227 | likely_pathogenic | 0.8546 | pathogenic | -1.205 | Destabilizing | 1.0 | D | 0.794 | deleterious | None | None | None | None | N |
L/D | 0.9659 | likely_pathogenic | 0.9646 | pathogenic | -2.205 | Highly Destabilizing | 1.0 | D | 0.89 | deleterious | None | None | None | None | N |
L/E | 0.8027 | likely_pathogenic | 0.8027 | pathogenic | -1.989 | Destabilizing | 1.0 | D | 0.88 | deleterious | None | None | None | None | N |
L/F | 0.3105 | likely_benign | 0.3616 | ambiguous | -1.257 | Destabilizing | 0.999 | D | 0.738 | prob.delet. | N | 0.509999826 | None | None | N |
L/G | 0.9075 | likely_pathogenic | 0.9129 | pathogenic | -2.618 | Highly Destabilizing | 1.0 | D | 0.866 | deleterious | None | None | None | None | N |
L/H | 0.7311 | likely_pathogenic | 0.7483 | pathogenic | -1.876 | Destabilizing | 1.0 | D | 0.869 | deleterious | D | 0.557755679 | None | None | N |
L/I | 0.0876 | likely_benign | 0.1004 | benign | -0.685 | Destabilizing | 0.884 | D | 0.364 | neutral | N | 0.503008783 | None | None | N |
L/K | 0.7786 | likely_pathogenic | 0.7735 | pathogenic | -1.548 | Destabilizing | 1.0 | D | 0.841 | deleterious | None | None | None | None | N |
L/M | 0.1506 | likely_benign | 0.1639 | benign | -0.536 | Destabilizing | 1.0 | D | 0.776 | deleterious | None | None | None | None | N |
L/N | 0.8772 | likely_pathogenic | 0.8777 | pathogenic | -1.894 | Destabilizing | 1.0 | D | 0.887 | deleterious | None | None | None | None | N |
L/P | 0.9012 | likely_pathogenic | 0.909 | pathogenic | -1.142 | Destabilizing | 1.0 | D | 0.887 | deleterious | D | 0.5459813 | None | None | N |
L/Q | 0.5933 | likely_pathogenic | 0.5926 | pathogenic | -1.772 | Destabilizing | 1.0 | D | 0.869 | deleterious | None | None | None | None | N |
L/R | 0.6822 | likely_pathogenic | 0.6758 | pathogenic | -1.279 | Destabilizing | 1.0 | D | 0.876 | deleterious | D | 0.5459813 | None | None | N |
L/S | 0.8239 | likely_pathogenic | 0.8324 | pathogenic | -2.562 | Highly Destabilizing | 1.0 | D | 0.826 | deleterious | None | None | None | None | N |
L/T | 0.5481 | ambiguous | 0.5685 | pathogenic | -2.2 | Highly Destabilizing | 1.0 | D | 0.755 | deleterious | None | None | None | None | N |
L/V | 0.1141 | likely_benign | 0.135 | benign | -1.142 | Destabilizing | 0.981 | D | 0.532 | neutral | D | 0.537526788 | None | None | N |
L/W | 0.5912 | likely_pathogenic | 0.6262 | pathogenic | -1.577 | Destabilizing | 1.0 | D | 0.804 | deleterious | None | None | None | None | N |
L/Y | 0.7041 | likely_pathogenic | 0.7443 | pathogenic | -1.236 | Destabilizing | 1.0 | D | 0.84 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.