Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6618 | 20077;20078;20079 | chr2:178727726;178727725;178727724 | chr2:179592453;179592452;179592451 |
N2AB | 6301 | 19126;19127;19128 | chr2:178727726;178727725;178727724 | chr2:179592453;179592452;179592451 |
N2A | 5374 | 16345;16346;16347 | chr2:178727726;178727725;178727724 | chr2:179592453;179592452;179592451 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | None | None | 0.811 | N | 0.403 | 0.119 | 0.178374595973 | gnomAD-4.0.0 | 1.36878E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 2.31949E-05 | 0 |
P/L | None | None | 0.938 | N | 0.491 | 0.291 | 0.512595481341 | gnomAD-4.0.0 | 3.18465E-06 | None | None | None | None | N | None | 5.66765E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86074E-06 | 0 | 0 |
P/S | rs1234787097 | -0.242 | 0.811 | N | 0.357 | 0.115 | 0.167679373172 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 5.56E-05 | None | 0 | None | 0 | 0 | 0 |
P/S | rs1234787097 | -0.242 | 0.811 | N | 0.357 | 0.115 | 0.167679373172 | gnomAD-4.0.0 | 6.84391E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.52016E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.0926 | likely_benign | 0.0977 | benign | -0.348 | Destabilizing | 0.811 | D | 0.403 | neutral | N | 0.481624206 | None | None | N |
P/C | 0.5793 | likely_pathogenic | 0.6732 | pathogenic | -0.813 | Destabilizing | 0.999 | D | 0.597 | neutral | None | None | None | None | N |
P/D | 0.3391 | likely_benign | 0.411 | ambiguous | -0.243 | Destabilizing | 0.976 | D | 0.365 | neutral | None | None | None | None | N |
P/E | 0.2259 | likely_benign | 0.2741 | benign | -0.345 | Destabilizing | 0.976 | D | 0.367 | neutral | None | None | None | None | N |
P/F | 0.5024 | ambiguous | 0.5561 | ambiguous | -0.671 | Destabilizing | 0.997 | D | 0.554 | neutral | None | None | None | None | N |
P/G | 0.2493 | likely_benign | 0.2813 | benign | -0.412 | Destabilizing | 0.034 | N | 0.315 | neutral | None | None | None | None | N |
P/H | 0.1985 | likely_benign | 0.2271 | benign | 0.041 | Stabilizing | 0.999 | D | 0.513 | neutral | N | 0.457075266 | None | None | N |
P/I | 0.369 | ambiguous | 0.4028 | ambiguous | -0.311 | Destabilizing | 0.976 | D | 0.555 | neutral | None | None | None | None | N |
P/K | 0.2578 | likely_benign | 0.3043 | benign | -0.372 | Destabilizing | 0.976 | D | 0.371 | neutral | None | None | None | None | N |
P/L | 0.1489 | likely_benign | 0.1616 | benign | -0.311 | Destabilizing | 0.938 | D | 0.491 | neutral | N | 0.475834385 | None | None | N |
P/M | 0.3206 | likely_benign | 0.3627 | ambiguous | -0.62 | Destabilizing | 0.999 | D | 0.512 | neutral | None | None | None | None | N |
P/N | 0.2682 | likely_benign | 0.2966 | benign | -0.195 | Destabilizing | 0.976 | D | 0.491 | neutral | None | None | None | None | N |
P/Q | 0.1367 | likely_benign | 0.1504 | benign | -0.371 | Destabilizing | 0.988 | D | 0.369 | neutral | None | None | None | None | N |
P/R | 0.1849 | likely_benign | 0.2138 | benign | 0.042 | Stabilizing | 0.984 | D | 0.483 | neutral | N | 0.425770924 | None | None | N |
P/S | 0.1123 | likely_benign | 0.1187 | benign | -0.528 | Destabilizing | 0.811 | D | 0.357 | neutral | N | 0.452666736 | None | None | N |
P/T | 0.1081 | likely_benign | 0.117 | benign | -0.537 | Destabilizing | 0.103 | N | 0.304 | neutral | N | 0.449282502 | None | None | N |
P/V | 0.2592 | likely_benign | 0.2862 | benign | -0.296 | Destabilizing | 0.952 | D | 0.41 | neutral | None | None | None | None | N |
P/W | 0.6103 | likely_pathogenic | 0.6887 | pathogenic | -0.725 | Destabilizing | 0.999 | D | 0.628 | neutral | None | None | None | None | N |
P/Y | 0.4392 | ambiguous | 0.5142 | ambiguous | -0.462 | Destabilizing | 0.999 | D | 0.554 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.