Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6619 | 20080;20081;20082 | chr2:178727723;178727722;178727721 | chr2:179592450;179592449;179592448 |
N2AB | 6302 | 19129;19130;19131 | chr2:178727723;178727722;178727721 | chr2:179592450;179592449;179592448 |
N2A | 5375 | 16348;16349;16350 | chr2:178727723;178727722;178727721 | chr2:179592450;179592449;179592448 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/E | rs1060500450 | 0.559 | 0.052 | N | 0.279 | 0.17 | 0.20549828249 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.88E-06 | 0 |
K/E | rs1060500450 | 0.559 | 0.052 | N | 0.279 | 0.17 | 0.20549828249 | gnomAD-3.1.2 | 1.97E-05 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 4.41E-05 | 0 | 0 |
K/E | rs1060500450 | 0.559 | 0.052 | N | 0.279 | 0.17 | 0.20549828249 | gnomAD-4.0.0 | 1.1536E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.15532E-05 | 0 | 0 |
K/T | rs368720026 | -0.275 | None | N | 0.109 | 0.105 | None | gnomAD-2.1.1 | 8.04E-06 | None | None | None | None | N | None | 6.47E-05 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 1.65728E-04 |
K/T | rs368720026 | -0.275 | None | N | 0.109 | 0.105 | None | gnomAD-3.1.2 | 5.92E-05 | None | None | None | None | N | None | 1.93087E-04 | 6.56E-05 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
K/T | rs368720026 | -0.275 | None | N | 0.109 | 0.105 | None | gnomAD-4.0.0 | 1.79463E-05 | None | None | None | None | N | None | 1.69279E-04 | 5.08613E-05 | None | 0 | 0 | None | 0 | 0 | 2.39479E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.1661 | likely_benign | 0.1933 | benign | 0.006 | Stabilizing | 0.035 | N | 0.267 | neutral | None | None | None | None | N |
K/C | 0.5926 | likely_pathogenic | 0.6933 | pathogenic | -0.171 | Destabilizing | 0.824 | D | 0.421 | neutral | None | None | None | None | N |
K/D | 0.2463 | likely_benign | 0.3285 | benign | 0.232 | Stabilizing | 0.081 | N | 0.309 | neutral | None | None | None | None | N |
K/E | 0.1078 | likely_benign | 0.148 | benign | 0.257 | Stabilizing | 0.052 | N | 0.279 | neutral | N | 0.498980603 | None | None | N |
K/F | 0.6051 | likely_pathogenic | 0.6773 | pathogenic | -0.126 | Destabilizing | 0.555 | D | 0.431 | neutral | None | None | None | None | N |
K/G | 0.2186 | likely_benign | 0.2764 | benign | -0.216 | Destabilizing | 0.035 | N | 0.287 | neutral | None | None | None | None | N |
K/H | 0.2169 | likely_benign | 0.254 | benign | -0.467 | Destabilizing | 0.555 | D | 0.385 | neutral | None | None | None | None | N |
K/I | 0.2834 | likely_benign | 0.3291 | benign | 0.516 | Stabilizing | 0.188 | N | 0.463 | neutral | N | 0.495825655 | None | None | N |
K/L | 0.2524 | likely_benign | 0.2939 | benign | 0.516 | Stabilizing | 0.081 | N | 0.311 | neutral | None | None | None | None | N |
K/M | 0.189 | likely_benign | 0.2201 | benign | 0.223 | Stabilizing | 0.555 | D | 0.381 | neutral | None | None | None | None | N |
K/N | 0.1868 | likely_benign | 0.2298 | benign | 0.267 | Stabilizing | None | N | 0.076 | neutral | N | 0.457517983 | None | None | N |
K/P | 0.4083 | ambiguous | 0.5287 | ambiguous | 0.374 | Stabilizing | 0.262 | N | 0.432 | neutral | None | None | None | None | N |
K/Q | 0.0986 | likely_benign | 0.1115 | benign | 0.143 | Stabilizing | 0.211 | N | 0.394 | neutral | N | 0.514411415 | None | None | N |
K/R | 0.0804 | likely_benign | 0.0835 | benign | -0.015 | Destabilizing | 0.117 | N | 0.307 | neutral | N | 0.397829387 | None | None | N |
K/S | 0.1811 | likely_benign | 0.2135 | benign | -0.244 | Destabilizing | 0.007 | N | 0.067 | neutral | None | None | None | None | N |
K/T | 0.1028 | likely_benign | 0.1067 | benign | -0.058 | Destabilizing | None | N | 0.109 | neutral | N | 0.462617158 | None | None | N |
K/V | 0.2265 | likely_benign | 0.2649 | benign | 0.374 | Stabilizing | 0.081 | N | 0.343 | neutral | None | None | None | None | N |
K/W | 0.6666 | likely_pathogenic | 0.7494 | pathogenic | -0.144 | Destabilizing | 0.935 | D | 0.469 | neutral | None | None | None | None | N |
K/Y | 0.4474 | ambiguous | 0.5314 | ambiguous | 0.207 | Stabilizing | 0.555 | D | 0.399 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.