Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6622 | 20089;20090;20091 | chr2:178727714;178727713;178727712 | chr2:179592441;179592440;179592439 |
N2AB | 6305 | 19138;19139;19140 | chr2:178727714;178727713;178727712 | chr2:179592441;179592440;179592439 |
N2A | 5378 | 16357;16358;16359 | chr2:178727714;178727713;178727712 | chr2:179592441;179592440;179592439 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/F | rs775092361 | -1.044 | 0.006 | N | 0.218 | 0.322 | 0.292423486923 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 5.56E-05 | None | 0 | None | 0 | 0 | 0 |
I/N | rs1413452032 | -1.391 | 0.927 | N | 0.626 | 0.544 | 0.822951172334 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.87E-06 | 0 |
I/N | rs1413452032 | -1.391 | 0.927 | N | 0.626 | 0.544 | 0.822951172334 | gnomAD-4.0.0 | 1.59231E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86072E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.222 | likely_benign | 0.1918 | benign | -1.898 | Destabilizing | 0.013 | N | 0.216 | neutral | None | None | None | None | I |
I/C | 0.7687 | likely_pathogenic | 0.6674 | pathogenic | -1.072 | Destabilizing | 0.981 | D | 0.529 | neutral | None | None | None | None | I |
I/D | 0.8752 | likely_pathogenic | 0.809 | pathogenic | -1.384 | Destabilizing | 0.828 | D | 0.637 | neutral | None | None | None | None | I |
I/E | 0.7157 | likely_pathogenic | 0.6495 | pathogenic | -1.205 | Destabilizing | 0.828 | D | 0.595 | neutral | None | None | None | None | I |
I/F | 0.1398 | likely_benign | 0.106 | benign | -0.993 | Destabilizing | 0.006 | N | 0.218 | neutral | N | 0.503649362 | None | None | I |
I/G | 0.7156 | likely_pathogenic | 0.6262 | pathogenic | -2.402 | Highly Destabilizing | 0.704 | D | 0.522 | neutral | None | None | None | None | I |
I/H | 0.6049 | likely_pathogenic | 0.5017 | ambiguous | -1.762 | Destabilizing | 0.981 | D | 0.577 | neutral | None | None | None | None | I |
I/K | 0.5342 | ambiguous | 0.4743 | ambiguous | -1.123 | Destabilizing | 0.704 | D | 0.587 | neutral | None | None | None | None | I |
I/L | 0.1123 | likely_benign | 0.1017 | benign | -0.486 | Destabilizing | 0.002 | N | 0.113 | neutral | D | 0.531731393 | None | None | I |
I/M | 0.0952 | likely_benign | 0.0938 | benign | -0.442 | Destabilizing | 0.139 | N | 0.24 | neutral | N | 0.513991709 | None | None | I |
I/N | 0.5268 | ambiguous | 0.4221 | ambiguous | -1.248 | Destabilizing | 0.927 | D | 0.626 | neutral | N | 0.520565529 | None | None | I |
I/P | 0.7741 | likely_pathogenic | 0.7107 | pathogenic | -0.932 | Destabilizing | 0.944 | D | 0.623 | neutral | None | None | None | None | I |
I/Q | 0.5526 | ambiguous | 0.4711 | ambiguous | -1.152 | Destabilizing | 0.944 | D | 0.609 | neutral | None | None | None | None | I |
I/R | 0.3781 | ambiguous | 0.3144 | benign | -0.918 | Destabilizing | 0.944 | D | 0.625 | neutral | None | None | None | None | I |
I/S | 0.2912 | likely_benign | 0.2362 | benign | -2.032 | Highly Destabilizing | 0.27 | N | 0.415 | neutral | N | 0.503017478 | None | None | I |
I/T | 0.1036 | likely_benign | 0.0917 | benign | -1.707 | Destabilizing | 0.01 | N | 0.213 | neutral | N | 0.486052086 | None | None | I |
I/V | 0.0854 | likely_benign | 0.079 | benign | -0.932 | Destabilizing | 0.139 | N | 0.237 | neutral | N | 0.492247498 | None | None | I |
I/W | 0.7323 | likely_pathogenic | 0.6263 | pathogenic | -1.278 | Destabilizing | 0.995 | D | 0.589 | neutral | None | None | None | None | I |
I/Y | 0.561 | ambiguous | 0.4651 | ambiguous | -0.956 | Destabilizing | 0.543 | D | 0.583 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.