Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6624 | 20095;20096;20097 | chr2:178727708;178727707;178727706 | chr2:179592435;179592434;179592433 |
N2AB | 6307 | 19144;19145;19146 | chr2:178727708;178727707;178727706 | chr2:179592435;179592434;179592433 |
N2A | 5380 | 16363;16364;16365 | chr2:178727708;178727707;178727706 | chr2:179592435;179592434;179592433 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/F | rs78279193 | -0.934 | 0.723 | N | 0.609 | 0.196 | 0.337868961071 | gnomAD-4.0.0 | 3.18506E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 1.8843E-05 | 0 | 0 | 0 | 3.02682E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.2131 | likely_benign | 0.1824 | benign | -1.005 | Destabilizing | 0.339 | N | 0.537 | neutral | None | None | None | None | N |
L/C | 0.4995 | ambiguous | 0.4522 | ambiguous | -0.767 | Destabilizing | 0.995 | D | 0.602 | neutral | None | None | None | None | N |
L/D | 0.6612 | likely_pathogenic | 0.5903 | pathogenic | 0.357 | Stabilizing | 0.554 | D | 0.673 | neutral | None | None | None | None | N |
L/E | 0.3093 | likely_benign | 0.2687 | benign | 0.355 | Stabilizing | 0.024 | N | 0.525 | neutral | None | None | None | None | N |
L/F | 0.1155 | likely_benign | 0.105 | benign | -0.603 | Destabilizing | 0.723 | D | 0.609 | neutral | N | 0.496631015 | None | None | N |
L/G | 0.5002 | ambiguous | 0.4434 | ambiguous | -1.287 | Destabilizing | 0.834 | D | 0.675 | neutral | None | None | None | None | N |
L/H | 0.2003 | likely_benign | 0.1861 | benign | -0.561 | Destabilizing | 0.965 | D | 0.659 | neutral | None | None | None | None | N |
L/I | 0.079 | likely_benign | 0.0702 | benign | -0.335 | Destabilizing | None | N | 0.283 | neutral | None | None | None | None | N |
L/K | 0.2104 | likely_benign | 0.1882 | benign | -0.411 | Destabilizing | 0.001 | N | 0.508 | neutral | None | None | None | None | N |
L/M | 0.0855 | likely_benign | 0.0796 | benign | -0.41 | Destabilizing | 0.007 | N | 0.271 | neutral | N | 0.488668524 | None | None | N |
L/N | 0.3461 | ambiguous | 0.2937 | benign | -0.242 | Destabilizing | 0.946 | D | 0.673 | neutral | None | None | None | None | N |
L/P | 0.5706 | likely_pathogenic | 0.5403 | ambiguous | -0.525 | Destabilizing | 0.982 | D | 0.677 | prob.neutral | None | None | None | None | N |
L/Q | 0.1227 | likely_benign | 0.1203 | benign | -0.333 | Destabilizing | 0.085 | N | 0.477 | neutral | None | None | None | None | N |
L/R | 0.1708 | likely_benign | 0.1618 | benign | -0.064 | Destabilizing | 0.331 | N | 0.675 | neutral | None | None | None | None | N |
L/S | 0.2213 | likely_benign | 0.1868 | benign | -0.955 | Destabilizing | 0.652 | D | 0.629 | neutral | N | 0.481222558 | None | None | N |
L/T | 0.1544 | likely_benign | 0.1348 | benign | -0.833 | Destabilizing | 0.427 | N | 0.55 | neutral | None | None | None | None | N |
L/V | 0.0838 | likely_benign | 0.0777 | benign | -0.525 | Destabilizing | 0.015 | N | 0.507 | neutral | N | 0.499328186 | None | None | N |
L/W | 0.2168 | likely_benign | 0.2012 | benign | -0.642 | Destabilizing | 0.996 | D | 0.659 | neutral | N | 0.51821799 | None | None | N |
L/Y | 0.3422 | ambiguous | 0.3039 | benign | -0.377 | Destabilizing | 0.452 | N | 0.64 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.