Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6627 | 20104;20105;20106 | chr2:178727699;178727698;178727697 | chr2:179592426;179592425;179592424 |
N2AB | 6310 | 19153;19154;19155 | chr2:178727699;178727698;178727697 | chr2:179592426;179592425;179592424 |
N2A | 5383 | 16372;16373;16374 | chr2:178727699;178727698;178727697 | chr2:179592426;179592425;179592424 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/L | rs773143754 | -0.162 | 0.037 | N | 0.307 | 0.259 | None | gnomAD-2.1.1 | 1.43E-05 | None | None | None | None | N | None | 0 | 5.66E-05 | None | 0 | 1.02491E-04 | None | 0 | None | 0 | 0 | 0 |
S/L | rs773143754 | -0.162 | 0.037 | N | 0.307 | 0.259 | None | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 1.93424E-04 | None | 0 | 0 | 0 | 0 | 0 |
S/L | rs773143754 | -0.162 | 0.037 | N | 0.307 | 0.259 | None | gnomAD-4.0.0 | 9.919E-06 | None | None | None | None | N | None | 0 | 1.66761E-05 | None | 0 | 2.22975E-05 | None | 0 | 0 | 2.54363E-06 | 8.7885E-05 | 4.80507E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.0932 | likely_benign | 0.0915 | benign | -0.513 | Destabilizing | 0.028 | N | 0.164 | neutral | D | 0.525957427 | None | None | N |
S/C | 0.1693 | likely_benign | 0.1698 | benign | -0.318 | Destabilizing | 0.993 | D | 0.475 | neutral | None | None | None | None | N |
S/D | 0.2966 | likely_benign | 0.3056 | benign | 0.896 | Stabilizing | 0.932 | D | 0.392 | neutral | None | None | None | None | N |
S/E | 0.415 | ambiguous | 0.4183 | ambiguous | 0.883 | Stabilizing | 0.932 | D | 0.303 | neutral | None | None | None | None | N |
S/F | 0.1986 | likely_benign | 0.1992 | benign | -0.929 | Destabilizing | 0.96 | D | 0.516 | neutral | None | None | None | None | N |
S/G | 0.1029 | likely_benign | 0.1082 | benign | -0.704 | Destabilizing | 0.737 | D | 0.303 | neutral | None | None | None | None | N |
S/H | 0.3467 | ambiguous | 0.3757 | ambiguous | -1.03 | Destabilizing | 0.998 | D | 0.478 | neutral | None | None | None | None | N |
S/I | 0.2073 | likely_benign | 0.2012 | benign | -0.121 | Destabilizing | 0.773 | D | 0.46 | neutral | None | None | None | None | N |
S/K | 0.5661 | likely_pathogenic | 0.5828 | pathogenic | -0.043 | Destabilizing | 0.932 | D | 0.297 | neutral | None | None | None | None | N |
S/L | 0.1038 | likely_benign | 0.0967 | benign | -0.121 | Destabilizing | 0.037 | N | 0.307 | neutral | N | 0.493829152 | None | None | N |
S/M | 0.2137 | likely_benign | 0.2091 | benign | -0.134 | Destabilizing | 0.38 | N | 0.316 | neutral | None | None | None | None | N |
S/N | 0.1096 | likely_benign | 0.1202 | benign | -0.024 | Destabilizing | 0.932 | D | 0.412 | neutral | None | None | None | None | N |
S/P | 0.1672 | likely_benign | 0.1748 | benign | -0.22 | Destabilizing | 0.973 | D | 0.485 | neutral | N | 0.485176259 | None | None | N |
S/Q | 0.4309 | ambiguous | 0.453 | ambiguous | -0.074 | Destabilizing | 0.98 | D | 0.458 | neutral | None | None | None | None | N |
S/R | 0.509 | ambiguous | 0.5253 | ambiguous | -0.058 | Destabilizing | 0.98 | D | 0.486 | neutral | None | None | None | None | N |
S/T | 0.0921 | likely_benign | 0.0883 | benign | -0.15 | Destabilizing | 0.064 | N | 0.163 | neutral | N | 0.462871527 | None | None | N |
S/V | 0.2093 | likely_benign | 0.2069 | benign | -0.22 | Destabilizing | 0.584 | D | 0.477 | neutral | None | None | None | None | N |
S/W | 0.3437 | ambiguous | 0.3655 | ambiguous | -0.925 | Destabilizing | 0.999 | D | 0.545 | neutral | N | 0.492266603 | None | None | N |
S/Y | 0.1673 | likely_benign | 0.1719 | benign | -0.6 | Destabilizing | 0.993 | D | 0.537 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.