Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6631 | 20116;20117;20118 | chr2:178727687;178727686;178727685 | chr2:179592414;179592413;179592412 |
N2AB | 6314 | 19165;19166;19167 | chr2:178727687;178727686;178727685 | chr2:179592414;179592413;179592412 |
N2A | 5387 | 16384;16385;16386 | chr2:178727687;178727686;178727685 | chr2:179592414;179592413;179592412 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/S | None | None | 1.0 | D | 0.888 | 0.806 | 0.88376241617 | gnomAD-4.0.0 | 1.36887E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.79948E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.9003 | likely_pathogenic | 0.8836 | pathogenic | -2.581 | Highly Destabilizing | 1.0 | D | 0.772 | deleterious | None | None | None | None | N |
L/C | 0.8329 | likely_pathogenic | 0.8013 | pathogenic | -1.705 | Destabilizing | 1.0 | D | 0.863 | deleterious | None | None | None | None | N |
L/D | 0.9992 | likely_pathogenic | 0.999 | pathogenic | -3.281 | Highly Destabilizing | 1.0 | D | 0.917 | deleterious | None | None | None | None | N |
L/E | 0.9919 | likely_pathogenic | 0.9914 | pathogenic | -2.949 | Highly Destabilizing | 1.0 | D | 0.897 | deleterious | None | None | None | None | N |
L/F | 0.6254 | likely_pathogenic | 0.6039 | pathogenic | -1.567 | Destabilizing | 1.0 | D | 0.828 | deleterious | D | 0.546715315 | None | None | N |
L/G | 0.9817 | likely_pathogenic | 0.9787 | pathogenic | -3.192 | Highly Destabilizing | 1.0 | D | 0.884 | deleterious | None | None | None | None | N |
L/H | 0.9753 | likely_pathogenic | 0.9759 | pathogenic | -2.992 | Highly Destabilizing | 1.0 | D | 0.898 | deleterious | None | None | None | None | N |
L/I | 0.2125 | likely_benign | 0.177 | benign | -0.732 | Destabilizing | 0.999 | D | 0.685 | prob.neutral | N | 0.508834511 | None | None | N |
L/K | 0.987 | likely_pathogenic | 0.9878 | pathogenic | -1.91 | Destabilizing | 1.0 | D | 0.886 | deleterious | None | None | None | None | N |
L/M | 0.3488 | ambiguous | 0.3397 | benign | -0.927 | Destabilizing | 1.0 | D | 0.814 | deleterious | None | None | None | None | N |
L/N | 0.9943 | likely_pathogenic | 0.9934 | pathogenic | -2.67 | Highly Destabilizing | 1.0 | D | 0.917 | deleterious | None | None | None | None | N |
L/P | 0.9928 | likely_pathogenic | 0.9931 | pathogenic | -1.341 | Destabilizing | 1.0 | D | 0.916 | deleterious | None | None | None | None | N |
L/Q | 0.9477 | likely_pathogenic | 0.9517 | pathogenic | -2.269 | Highly Destabilizing | 1.0 | D | 0.917 | deleterious | None | None | None | None | N |
L/R | 0.9621 | likely_pathogenic | 0.9662 | pathogenic | -2.115 | Highly Destabilizing | 1.0 | D | 0.907 | deleterious | None | None | None | None | N |
L/S | 0.9818 | likely_pathogenic | 0.9783 | pathogenic | -3.181 | Highly Destabilizing | 1.0 | D | 0.888 | deleterious | D | 0.560264121 | None | None | N |
L/T | 0.9471 | likely_pathogenic | 0.9394 | pathogenic | -2.677 | Highly Destabilizing | 1.0 | D | 0.839 | deleterious | None | None | None | None | N |
L/V | 0.2257 | likely_benign | 0.2009 | benign | -1.341 | Destabilizing | 0.999 | D | 0.681 | prob.neutral | D | 0.546968805 | None | None | N |
L/W | 0.9357 | likely_pathogenic | 0.9268 | pathogenic | -1.95 | Destabilizing | 1.0 | D | 0.881 | deleterious | None | None | None | None | N |
L/Y | 0.9634 | likely_pathogenic | 0.9614 | pathogenic | -1.744 | Destabilizing | 1.0 | D | 0.875 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.