Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6638 | 20137;20138;20139 | chr2:178727666;178727665;178727664 | chr2:179592393;179592392;179592391 |
N2AB | 6321 | 19186;19187;19188 | chr2:178727666;178727665;178727664 | chr2:179592393;179592392;179592391 |
N2A | 5394 | 16405;16406;16407 | chr2:178727666;178727665;178727664 | chr2:179592393;179592392;179592391 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/T | rs878890344 | None | None | N | 0.221 | 0.095 | 0.0482279557977 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
A/T | rs878890344 | None | None | N | 0.221 | 0.095 | 0.0482279557977 | gnomAD-4.0.0 | 3.72E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.08783E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.4148 | ambiguous | 0.4686 | ambiguous | -0.711 | Destabilizing | 0.676 | D | 0.273 | neutral | None | None | None | None | N |
A/D | 0.2131 | likely_benign | 0.2214 | benign | -0.539 | Destabilizing | 0.029 | N | 0.345 | neutral | N | 0.471716644 | None | None | N |
A/E | 0.2158 | likely_benign | 0.23 | benign | -0.692 | Destabilizing | 0.038 | N | 0.325 | neutral | None | None | None | None | N |
A/F | 0.2333 | likely_benign | 0.235 | benign | -0.937 | Destabilizing | 0.214 | N | 0.361 | neutral | None | None | None | None | N |
A/G | 0.111 | likely_benign | 0.1108 | benign | -0.387 | Destabilizing | None | N | 0.207 | neutral | N | 0.439124223 | None | None | N |
A/H | 0.3439 | ambiguous | 0.3769 | ambiguous | -0.44 | Destabilizing | 0.676 | D | 0.31 | neutral | None | None | None | None | N |
A/I | 0.158 | likely_benign | 0.1486 | benign | -0.349 | Destabilizing | None | N | 0.198 | neutral | None | None | None | None | N |
A/K | 0.3259 | likely_benign | 0.3497 | ambiguous | -0.684 | Destabilizing | 0.038 | N | 0.324 | neutral | None | None | None | None | N |
A/L | 0.137 | likely_benign | 0.136 | benign | -0.349 | Destabilizing | None | N | 0.191 | neutral | None | None | None | None | N |
A/M | 0.1842 | likely_benign | 0.175 | benign | -0.338 | Destabilizing | 0.214 | N | 0.285 | neutral | None | None | None | None | N |
A/N | 0.1665 | likely_benign | 0.1719 | benign | -0.31 | Destabilizing | 0.12 | N | 0.391 | neutral | None | None | None | None | N |
A/P | 0.1231 | likely_benign | 0.1291 | benign | -0.306 | Destabilizing | 0.171 | N | 0.337 | neutral | N | 0.356313625 | None | None | N |
A/Q | 0.2775 | likely_benign | 0.2986 | benign | -0.604 | Destabilizing | 0.214 | N | 0.295 | neutral | None | None | None | None | N |
A/R | 0.2981 | likely_benign | 0.3191 | benign | -0.195 | Destabilizing | 0.214 | N | 0.32 | neutral | None | None | None | None | N |
A/S | 0.0797 | likely_benign | 0.0816 | benign | -0.515 | Destabilizing | None | N | 0.103 | neutral | N | 0.444356684 | None | None | N |
A/T | 0.0762 | likely_benign | 0.0763 | benign | -0.589 | Destabilizing | None | N | 0.221 | neutral | N | 0.387791326 | None | None | N |
A/V | 0.0963 | likely_benign | 0.091 | benign | -0.306 | Destabilizing | None | N | 0.107 | neutral | N | 0.417804801 | None | None | N |
A/W | 0.5861 | likely_pathogenic | 0.6268 | pathogenic | -1.082 | Destabilizing | 0.864 | D | 0.369 | neutral | None | None | None | None | N |
A/Y | 0.325 | likely_benign | 0.3542 | ambiguous | -0.731 | Destabilizing | 0.356 | N | 0.334 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.