Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6640 | 20143;20144;20145 | chr2:178727660;178727659;178727658 | chr2:179592387;179592386;179592385 |
N2AB | 6323 | 19192;19193;19194 | chr2:178727660;178727659;178727658 | chr2:179592387;179592386;179592385 |
N2A | 5396 | 16411;16412;16413 | chr2:178727660;178727659;178727658 | chr2:179592387;179592386;179592385 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/E | None | None | 0.27 | N | 0.545 | 0.192 | 0.303123707472 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.2786 | likely_benign | 0.2934 | benign | -0.972 | Destabilizing | 0.329 | N | 0.569 | neutral | None | None | None | None | N |
K/C | 0.6389 | likely_pathogenic | 0.669 | pathogenic | -0.977 | Destabilizing | 0.995 | D | 0.775 | deleterious | None | None | None | None | N |
K/D | 0.4594 | ambiguous | 0.4987 | ambiguous | -0.287 | Destabilizing | 0.704 | D | 0.667 | neutral | None | None | None | None | N |
K/E | 0.1375 | likely_benign | 0.1546 | benign | -0.127 | Destabilizing | 0.27 | N | 0.545 | neutral | N | 0.402879074 | None | None | N |
K/F | 0.7652 | likely_pathogenic | 0.7784 | pathogenic | -0.699 | Destabilizing | 0.944 | D | 0.795 | deleterious | None | None | None | None | N |
K/G | 0.3604 | ambiguous | 0.3718 | ambiguous | -1.348 | Destabilizing | 0.543 | D | 0.681 | prob.neutral | None | None | None | None | N |
K/H | 0.2831 | likely_benign | 0.2973 | benign | -1.484 | Destabilizing | 0.007 | N | 0.45 | neutral | None | None | None | None | N |
K/I | 0.4138 | ambiguous | 0.4424 | ambiguous | 0.02 | Stabilizing | 0.944 | D | 0.79 | deleterious | None | None | None | None | N |
K/L | 0.3389 | likely_benign | 0.3638 | ambiguous | 0.02 | Stabilizing | 0.704 | D | 0.723 | prob.delet. | None | None | None | None | N |
K/M | 0.2088 | likely_benign | 0.2341 | benign | -0.143 | Destabilizing | 0.975 | D | 0.721 | prob.delet. | N | 0.417272523 | None | None | N |
K/N | 0.3364 | likely_benign | 0.3591 | ambiguous | -0.861 | Destabilizing | 0.642 | D | 0.587 | neutral | N | 0.402705716 | None | None | N |
K/P | 0.8341 | likely_pathogenic | 0.8312 | pathogenic | -0.283 | Destabilizing | 0.944 | D | 0.728 | prob.delet. | None | None | None | None | N |
K/Q | 0.1049 | likely_benign | 0.1096 | benign | -0.785 | Destabilizing | 0.065 | N | 0.352 | neutral | N | 0.327517311 | None | None | N |
K/R | 0.0817 | likely_benign | 0.078 | benign | -0.66 | Destabilizing | 0.006 | N | 0.335 | neutral | N | 0.441706821 | None | None | N |
K/S | 0.302 | likely_benign | 0.3263 | benign | -1.568 | Destabilizing | 0.031 | N | 0.346 | neutral | None | None | None | None | N |
K/T | 0.1588 | likely_benign | 0.1729 | benign | -1.169 | Destabilizing | 0.473 | N | 0.658 | neutral | N | 0.441706821 | None | None | N |
K/V | 0.3153 | likely_benign | 0.3382 | benign | -0.283 | Destabilizing | 0.704 | D | 0.735 | prob.delet. | None | None | None | None | N |
K/W | 0.7318 | likely_pathogenic | 0.753 | pathogenic | -0.571 | Destabilizing | 0.995 | D | 0.775 | deleterious | None | None | None | None | N |
K/Y | 0.5474 | ambiguous | 0.5824 | pathogenic | -0.295 | Destabilizing | 0.893 | D | 0.767 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.