Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6644 | 20155;20156;20157 | chr2:178727648;178727647;178727646 | chr2:179592375;179592374;179592373 |
N2AB | 6327 | 19204;19205;19206 | chr2:178727648;178727647;178727646 | chr2:179592375;179592374;179592373 |
N2A | 5400 | 16423;16424;16425 | chr2:178727648;178727647;178727646 | chr2:179592375;179592374;179592373 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/C | rs375417679 | None | 1.0 | D | 0.877 | 0.875 | None | gnomAD-2.1.1 | 4.06E-06 | None | None | None | None | N | None | 0 | 2.94E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
Y/C | rs375417679 | None | 1.0 | D | 0.877 | 0.875 | None | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 0 | 6.56E-05 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
Y/C | rs375417679 | None | 1.0 | D | 0.877 | 0.875 | None | gnomAD-4.0.0 | 1.86266E-06 | None | None | None | None | N | None | 0 | 5.04117E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/A | 0.9881 | likely_pathogenic | 0.9908 | pathogenic | -1.919 | Destabilizing | 1.0 | D | 0.859 | deleterious | None | None | None | None | N |
Y/C | 0.8905 | likely_pathogenic | 0.8894 | pathogenic | -1.116 | Destabilizing | 1.0 | D | 0.877 | deleterious | D | 0.649012267 | None | None | N |
Y/D | 0.9956 | likely_pathogenic | 0.9971 | pathogenic | -2.667 | Highly Destabilizing | 1.0 | D | 0.877 | deleterious | D | 0.649012267 | None | None | N |
Y/E | 0.9974 | likely_pathogenic | 0.9982 | pathogenic | -2.416 | Highly Destabilizing | 1.0 | D | 0.891 | deleterious | None | None | None | None | N |
Y/F | 0.1659 | likely_benign | 0.1669 | benign | -0.609 | Destabilizing | 1.0 | D | 0.685 | prob.neutral | D | 0.585500952 | None | None | N |
Y/G | 0.9837 | likely_pathogenic | 0.9875 | pathogenic | -2.365 | Highly Destabilizing | 1.0 | D | 0.89 | deleterious | None | None | None | None | N |
Y/H | 0.9634 | likely_pathogenic | 0.9686 | pathogenic | -2.05 | Highly Destabilizing | 1.0 | D | 0.787 | deleterious | D | 0.648810463 | None | None | N |
Y/I | 0.7763 | likely_pathogenic | 0.7897 | pathogenic | -0.443 | Destabilizing | 1.0 | D | 0.844 | deleterious | None | None | None | None | N |
Y/K | 0.9977 | likely_pathogenic | 0.9983 | pathogenic | -1.463 | Destabilizing | 1.0 | D | 0.889 | deleterious | None | None | None | None | N |
Y/L | 0.7382 | likely_pathogenic | 0.775 | pathogenic | -0.443 | Destabilizing | 0.999 | D | 0.78 | deleterious | None | None | None | None | N |
Y/M | 0.9233 | likely_pathogenic | 0.9361 | pathogenic | -0.565 | Destabilizing | 1.0 | D | 0.831 | deleterious | None | None | None | None | N |
Y/N | 0.9715 | likely_pathogenic | 0.9784 | pathogenic | -2.375 | Highly Destabilizing | 1.0 | D | 0.879 | deleterious | D | 0.649012267 | None | None | N |
Y/P | 0.9978 | likely_pathogenic | 0.9985 | pathogenic | -0.951 | Destabilizing | 1.0 | D | 0.902 | deleterious | None | None | None | None | N |
Y/Q | 0.9967 | likely_pathogenic | 0.9974 | pathogenic | -1.888 | Destabilizing | 1.0 | D | 0.833 | deleterious | None | None | None | None | N |
Y/R | 0.9931 | likely_pathogenic | 0.9942 | pathogenic | -1.923 | Destabilizing | 1.0 | D | 0.881 | deleterious | None | None | None | None | N |
Y/S | 0.9846 | likely_pathogenic | 0.9883 | pathogenic | -2.609 | Highly Destabilizing | 1.0 | D | 0.889 | deleterious | D | 0.649012267 | None | None | N |
Y/T | 0.9905 | likely_pathogenic | 0.9927 | pathogenic | -2.206 | Highly Destabilizing | 1.0 | D | 0.891 | deleterious | None | None | None | None | N |
Y/V | 0.7039 | likely_pathogenic | 0.7269 | pathogenic | -0.951 | Destabilizing | 1.0 | D | 0.818 | deleterious | None | None | None | None | N |
Y/W | 0.858 | likely_pathogenic | 0.8723 | pathogenic | -0.024 | Destabilizing | 1.0 | D | 0.781 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.