Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6648 | 20167;20168;20169 | chr2:178727636;178727635;178727634 | chr2:179592363;179592362;179592361 |
N2AB | 6331 | 19216;19217;19218 | chr2:178727636;178727635;178727634 | chr2:179592363;179592362;179592361 |
N2A | 5404 | 16435;16436;16437 | chr2:178727636;178727635;178727634 | chr2:179592363;179592362;179592361 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | None | None | 0.939 | N | 0.612 | 0.309 | 0.53974568202 | gnomAD-4.0.0 | 6.90254E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 1.67051E-05 |
V/G | rs752299031 | -3.252 | 0.997 | N | 0.843 | 0.723 | 0.928001726772 | gnomAD-2.1.1 | 8.41E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 1.83E-05 | 0 |
V/G | rs752299031 | -3.252 | 0.997 | N | 0.843 | 0.723 | 0.928001726772 | gnomAD-4.0.0 | 1.38051E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.80831E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.3711 | ambiguous | 0.3863 | ambiguous | -2.241 | Highly Destabilizing | 0.939 | D | 0.612 | neutral | N | 0.452760816 | None | None | N |
V/C | 0.9127 | likely_pathogenic | 0.9201 | pathogenic | -2.065 | Highly Destabilizing | 0.999 | D | 0.824 | deleterious | None | None | None | None | N |
V/D | 0.9882 | likely_pathogenic | 0.9911 | pathogenic | -2.894 | Highly Destabilizing | 0.997 | D | 0.855 | deleterious | D | 0.546106204 | None | None | N |
V/E | 0.9779 | likely_pathogenic | 0.9811 | pathogenic | -2.681 | Highly Destabilizing | 0.998 | D | 0.849 | deleterious | None | None | None | None | N |
V/F | 0.6566 | likely_pathogenic | 0.7079 | pathogenic | -1.319 | Destabilizing | 0.982 | D | 0.848 | deleterious | D | 0.545852715 | None | None | N |
V/G | 0.6976 | likely_pathogenic | 0.7118 | pathogenic | -2.771 | Highly Destabilizing | 0.997 | D | 0.843 | deleterious | N | 0.519354669 | None | None | N |
V/H | 0.9917 | likely_pathogenic | 0.9935 | pathogenic | -2.428 | Highly Destabilizing | 0.999 | D | 0.847 | deleterious | None | None | None | None | N |
V/I | 0.0945 | likely_benign | 0.1027 | benign | -0.755 | Destabilizing | 0.046 | N | 0.234 | neutral | D | 0.527195151 | None | None | N |
V/K | 0.9848 | likely_pathogenic | 0.9876 | pathogenic | -1.79 | Destabilizing | 0.993 | D | 0.849 | deleterious | None | None | None | None | N |
V/L | 0.4749 | ambiguous | 0.5094 | ambiguous | -0.755 | Destabilizing | 0.76 | D | 0.529 | neutral | D | 0.526481012 | None | None | N |
V/M | 0.449 | ambiguous | 0.4828 | ambiguous | -0.995 | Destabilizing | 0.986 | D | 0.757 | deleterious | None | None | None | None | N |
V/N | 0.969 | likely_pathogenic | 0.9746 | pathogenic | -2.137 | Highly Destabilizing | 0.998 | D | 0.877 | deleterious | None | None | None | None | N |
V/P | 0.9898 | likely_pathogenic | 0.9932 | pathogenic | -1.224 | Destabilizing | 0.998 | D | 0.855 | deleterious | None | None | None | None | N |
V/Q | 0.9717 | likely_pathogenic | 0.9769 | pathogenic | -1.997 | Destabilizing | 0.998 | D | 0.874 | deleterious | None | None | None | None | N |
V/R | 0.9704 | likely_pathogenic | 0.9756 | pathogenic | -1.612 | Destabilizing | 0.998 | D | 0.877 | deleterious | None | None | None | None | N |
V/S | 0.8053 | likely_pathogenic | 0.8147 | pathogenic | -2.775 | Highly Destabilizing | 0.993 | D | 0.835 | deleterious | None | None | None | None | N |
V/T | 0.6942 | likely_pathogenic | 0.6939 | pathogenic | -2.418 | Highly Destabilizing | 0.953 | D | 0.697 | prob.neutral | None | None | None | None | N |
V/W | 0.9938 | likely_pathogenic | 0.9958 | pathogenic | -1.787 | Destabilizing | 0.999 | D | 0.829 | deleterious | None | None | None | None | N |
V/Y | 0.9681 | likely_pathogenic | 0.9756 | pathogenic | -1.464 | Destabilizing | 0.998 | D | 0.835 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.