Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6649 | 20170;20171;20172 | chr2:178727633;178727632;178727631 | chr2:179592360;179592359;179592358 |
N2AB | 6332 | 19219;19220;19221 | chr2:178727633;178727632;178727631 | chr2:179592360;179592359;179592358 |
N2A | 5405 | 16438;16439;16440 | chr2:178727633;178727632;178727631 | chr2:179592360;179592359;179592358 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | rs767035458 | -0.013 | 0.351 | D | 0.46 | 0.261 | 0.537402380065 | gnomAD-2.1.1 | 4.2E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 9.17E-06 | 0 |
T/I | rs767035458 | -0.013 | 0.351 | D | 0.46 | 0.261 | 0.537402380065 | gnomAD-4.0.0 | 1.62667E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.9108E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0883 | likely_benign | 0.088 | benign | -0.975 | Destabilizing | 0.001 | N | 0.114 | neutral | N | 0.485861048 | None | None | N |
T/C | 0.451 | ambiguous | 0.4663 | ambiguous | -0.713 | Destabilizing | 0.836 | D | 0.479 | neutral | None | None | None | None | N |
T/D | 0.3572 | ambiguous | 0.3602 | ambiguous | -0.654 | Destabilizing | 0.418 | N | 0.471 | neutral | None | None | None | None | N |
T/E | 0.2684 | likely_benign | 0.2637 | benign | -0.651 | Destabilizing | 0.418 | N | 0.459 | neutral | None | None | None | None | N |
T/F | 0.2465 | likely_benign | 0.2526 | benign | -1.105 | Destabilizing | 0.002 | N | 0.384 | neutral | None | None | None | None | N |
T/G | 0.259 | likely_benign | 0.2664 | benign | -1.225 | Destabilizing | 0.129 | N | 0.546 | neutral | None | None | None | None | N |
T/H | 0.2531 | likely_benign | 0.288 | benign | -1.532 | Destabilizing | 0.94 | D | 0.531 | neutral | None | None | None | None | N |
T/I | 0.1937 | likely_benign | 0.1962 | benign | -0.396 | Destabilizing | 0.351 | N | 0.46 | neutral | D | 0.525173567 | None | None | N |
T/K | 0.2148 | likely_benign | 0.2244 | benign | -0.834 | Destabilizing | 0.418 | N | 0.457 | neutral | None | None | None | None | N |
T/L | 0.1317 | likely_benign | 0.1293 | benign | -0.396 | Destabilizing | 0.129 | N | 0.459 | neutral | None | None | None | None | N |
T/M | 0.1007 | likely_benign | 0.0994 | benign | -0.011 | Destabilizing | 0.94 | D | 0.481 | neutral | None | None | None | None | N |
T/N | 0.1307 | likely_benign | 0.1313 | benign | -0.832 | Destabilizing | 0.351 | N | 0.397 | neutral | N | 0.486875006 | None | None | N |
T/P | 0.6268 | likely_pathogenic | 0.6166 | pathogenic | -0.558 | Destabilizing | 0.523 | D | 0.489 | neutral | D | 0.52393289 | None | None | N |
T/Q | 0.2051 | likely_benign | 0.2191 | benign | -1.072 | Destabilizing | 0.836 | D | 0.469 | neutral | None | None | None | None | N |
T/R | 0.161 | likely_benign | 0.1678 | benign | -0.558 | Destabilizing | 0.418 | N | 0.484 | neutral | None | None | None | None | N |
T/S | 0.094 | likely_benign | 0.0974 | benign | -1.098 | Destabilizing | 0.001 | N | 0.123 | neutral | N | 0.415253725 | None | None | N |
T/V | 0.1579 | likely_benign | 0.1636 | benign | -0.558 | Destabilizing | 0.129 | N | 0.37 | neutral | None | None | None | None | N |
T/W | 0.5679 | likely_pathogenic | 0.6074 | pathogenic | -1.004 | Destabilizing | 0.983 | D | 0.511 | neutral | None | None | None | None | N |
T/Y | 0.2944 | likely_benign | 0.3159 | benign | -0.766 | Destabilizing | 0.557 | D | 0.535 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.