Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6661 | 20206;20207;20208 | chr2:178727597;178727596;178727595 | chr2:179592324;179592323;179592322 |
N2AB | 6344 | 19255;19256;19257 | chr2:178727597;178727596;178727595 | chr2:179592324;179592323;179592322 |
N2A | 5417 | 16474;16475;16476 | chr2:178727597;178727596;178727595 | chr2:179592324;179592323;179592322 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/S | rs772138264 | -3.619 | 1.0 | D | 0.889 | 0.705 | 0.858812690212 | gnomAD-2.1.1 | 9.12E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 8.51E-05 | None | 0 | 0 | 0 |
L/S | rs772138264 | -3.619 | 1.0 | D | 0.889 | 0.705 | 0.858812690212 | gnomAD-4.0.0 | 8.51844E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 6.46726E-05 | 3.19857E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.9122 | likely_pathogenic | 0.8989 | pathogenic | -3.035 | Highly Destabilizing | 1.0 | D | 0.729 | prob.delet. | None | None | None | None | N |
L/C | 0.9414 | likely_pathogenic | 0.9267 | pathogenic | -2.309 | Highly Destabilizing | 1.0 | D | 0.848 | deleterious | None | None | None | None | N |
L/D | 0.9981 | likely_pathogenic | 0.9978 | pathogenic | -3.659 | Highly Destabilizing | 1.0 | D | 0.907 | deleterious | None | None | None | None | N |
L/E | 0.9885 | likely_pathogenic | 0.9873 | pathogenic | -3.348 | Highly Destabilizing | 1.0 | D | 0.891 | deleterious | None | None | None | None | N |
L/F | 0.6747 | likely_pathogenic | 0.6594 | pathogenic | -1.837 | Destabilizing | 0.907 | D | 0.438 | neutral | N | 0.516844729 | None | None | N |
L/G | 0.9796 | likely_pathogenic | 0.9766 | pathogenic | -3.659 | Highly Destabilizing | 1.0 | D | 0.903 | deleterious | None | None | None | None | N |
L/H | 0.9711 | likely_pathogenic | 0.9711 | pathogenic | -3.19 | Highly Destabilizing | 1.0 | D | 0.885 | deleterious | None | None | None | None | N |
L/I | 0.2587 | likely_benign | 0.2218 | benign | -1.167 | Destabilizing | 0.992 | D | 0.572 | neutral | None | None | None | None | N |
L/K | 0.9858 | likely_pathogenic | 0.9859 | pathogenic | -2.463 | Highly Destabilizing | 1.0 | D | 0.898 | deleterious | None | None | None | None | N |
L/M | 0.4213 | ambiguous | 0.4049 | ambiguous | -1.22 | Destabilizing | 1.0 | D | 0.803 | deleterious | D | 0.531176776 | None | None | N |
L/N | 0.9878 | likely_pathogenic | 0.9871 | pathogenic | -3.101 | Highly Destabilizing | 1.0 | D | 0.908 | deleterious | None | None | None | None | N |
L/P | 0.9889 | likely_pathogenic | 0.9865 | pathogenic | -1.778 | Destabilizing | 1.0 | D | 0.909 | deleterious | None | None | None | None | N |
L/Q | 0.9532 | likely_pathogenic | 0.9544 | pathogenic | -2.807 | Highly Destabilizing | 1.0 | D | 0.907 | deleterious | None | None | None | None | N |
L/R | 0.9618 | likely_pathogenic | 0.9637 | pathogenic | -2.322 | Highly Destabilizing | 1.0 | D | 0.895 | deleterious | None | None | None | None | N |
L/S | 0.984 | likely_pathogenic | 0.9816 | pathogenic | -3.757 | Highly Destabilizing | 1.0 | D | 0.889 | deleterious | D | 0.550041499 | None | None | N |
L/T | 0.949 | likely_pathogenic | 0.939 | pathogenic | -3.28 | Highly Destabilizing | 1.0 | D | 0.859 | deleterious | None | None | None | None | N |
L/V | 0.2683 | likely_benign | 0.2248 | benign | -1.778 | Destabilizing | 0.992 | D | 0.573 | neutral | N | 0.488235726 | None | None | N |
L/W | 0.9476 | likely_pathogenic | 0.9491 | pathogenic | -2.274 | Highly Destabilizing | 1.0 | D | 0.874 | deleterious | D | 0.550041499 | None | None | N |
L/Y | 0.9455 | likely_pathogenic | 0.9484 | pathogenic | -2.048 | Highly Destabilizing | 0.997 | D | 0.863 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.