Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6662 | 20209;20210;20211 | chr2:178727594;178727593;178727592 | chr2:179592321;179592320;179592319 |
N2AB | 6345 | 19258;19259;19260 | chr2:178727594;178727593;178727592 | chr2:179592321;179592320;179592319 |
N2A | 5418 | 16477;16478;16479 | chr2:178727594;178727593;178727592 | chr2:179592321;179592320;179592319 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/F | rs2079581150 | None | 0.006 | N | 0.14 | 0.13 | 0.38342384377 | gnomAD-4.0.0 | 1.72006E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.64447E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.1552 | likely_benign | 0.1375 | benign | -1.222 | Destabilizing | 0.495 | N | 0.435 | neutral | None | None | None | None | N |
L/C | 0.5087 | ambiguous | 0.4448 | ambiguous | -0.691 | Destabilizing | 0.995 | D | 0.427 | neutral | None | None | None | None | N |
L/D | 0.4184 | ambiguous | 0.3734 | ambiguous | -0.606 | Destabilizing | 0.543 | D | 0.565 | neutral | None | None | None | None | N |
L/E | 0.1912 | likely_benign | 0.1935 | benign | -0.663 | Destabilizing | 0.031 | N | 0.45 | neutral | None | None | None | None | N |
L/F | 0.0957 | likely_benign | 0.089 | benign | -0.985 | Destabilizing | 0.006 | N | 0.14 | neutral | N | 0.385045462 | None | None | N |
L/G | 0.4327 | ambiguous | 0.379 | ambiguous | -1.474 | Destabilizing | 0.543 | D | 0.557 | neutral | None | None | None | None | N |
L/H | 0.1323 | likely_benign | 0.1223 | benign | -0.693 | Destabilizing | 0.927 | D | 0.515 | neutral | N | 0.472144371 | None | None | N |
L/I | 0.0787 | likely_benign | 0.0728 | benign | -0.64 | Destabilizing | 0.006 | N | 0.253 | neutral | N | 0.403649865 | None | None | N |
L/K | 0.2046 | likely_benign | 0.2013 | benign | -0.704 | Destabilizing | 0.704 | D | 0.522 | neutral | None | None | None | None | N |
L/M | 0.0927 | likely_benign | 0.0908 | benign | -0.444 | Destabilizing | 0.176 | N | 0.295 | neutral | None | None | None | None | N |
L/N | 0.2423 | likely_benign | 0.2048 | benign | -0.428 | Destabilizing | 0.017 | N | 0.457 | neutral | None | None | None | None | N |
L/P | 0.6377 | likely_pathogenic | 0.6192 | pathogenic | -0.801 | Destabilizing | 0.975 | D | 0.553 | neutral | N | 0.520706322 | None | None | N |
L/Q | 0.0989 | likely_benign | 0.1011 | benign | -0.68 | Destabilizing | 0.893 | D | 0.523 | neutral | None | None | None | None | N |
L/R | 0.1363 | likely_benign | 0.1406 | benign | -0.082 | Destabilizing | 0.863 | D | 0.525 | neutral | N | 0.455193406 | None | None | N |
L/S | 0.1571 | likely_benign | 0.1328 | benign | -0.987 | Destabilizing | 0.543 | D | 0.518 | neutral | None | None | None | None | N |
L/T | 0.116 | likely_benign | 0.1059 | benign | -0.935 | Destabilizing | 0.013 | N | 0.159 | neutral | None | None | None | None | N |
L/V | 0.0767 | likely_benign | 0.0732 | benign | -0.801 | Destabilizing | 0.27 | N | 0.337 | neutral | N | 0.420888832 | None | None | N |
L/W | 0.1771 | likely_benign | 0.1732 | benign | -0.994 | Destabilizing | 0.995 | D | 0.483 | neutral | None | None | None | None | N |
L/Y | 0.2382 | likely_benign | 0.2241 | benign | -0.766 | Destabilizing | 0.807 | D | 0.468 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.