Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6670 | 20233;20234;20235 | chr2:178727357;178727356;178727355 | chr2:179592084;179592083;179592082 |
N2AB | 6353 | 19282;19283;19284 | chr2:178727357;178727356;178727355 | chr2:179592084;179592083;179592082 |
N2A | 5426 | 16501;16502;16503 | chr2:178727357;178727356;178727355 | chr2:179592084;179592083;179592082 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | None | None | 0.003 | N | 0.101 | 0.144 | 0.300449992093 | gnomAD-4.0.0 | 2.07413E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.05413E-07 | 2.3955E-05 | 0 |
V/I | rs749601124 | -0.185 | 0.008 | N | 0.169 | 0.052 | 0.24896430686 | gnomAD-2.1.1 | 4.26E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 9.31E-06 | 0 |
V/I | rs749601124 | -0.185 | 0.008 | N | 0.169 | 0.052 | 0.24896430686 | gnomAD-4.0.0 | 1.38357E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.81148E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.2155 | likely_benign | 0.2782 | benign | -1.044 | Destabilizing | 0.003 | N | 0.101 | neutral | N | 0.456096961 | None | None | N |
V/C | 0.7686 | likely_pathogenic | 0.8347 | pathogenic | -0.708 | Destabilizing | 0.989 | D | 0.441 | neutral | None | None | None | None | N |
V/D | 0.4189 | ambiguous | 0.6142 | pathogenic | -0.825 | Destabilizing | 0.858 | D | 0.434 | neutral | None | None | None | None | N |
V/E | 0.3005 | likely_benign | 0.4269 | ambiguous | -0.855 | Destabilizing | 0.075 | N | 0.247 | neutral | N | 0.453236579 | None | None | N |
V/F | 0.2037 | likely_benign | 0.2465 | benign | -0.809 | Destabilizing | 0.923 | D | 0.426 | neutral | None | None | None | None | N |
V/G | 0.2485 | likely_benign | 0.3186 | benign | -1.301 | Destabilizing | 0.565 | D | 0.419 | neutral | N | 0.480241604 | None | None | N |
V/H | 0.5647 | likely_pathogenic | 0.6668 | pathogenic | -0.698 | Destabilizing | 0.996 | D | 0.533 | neutral | None | None | None | None | N |
V/I | 0.0766 | likely_benign | 0.0757 | benign | -0.461 | Destabilizing | 0.008 | N | 0.169 | neutral | N | 0.429021873 | None | None | N |
V/K | 0.4043 | ambiguous | 0.5574 | ambiguous | -0.959 | Destabilizing | 0.923 | D | 0.423 | neutral | None | None | None | None | N |
V/L | 0.1628 | likely_benign | 0.1902 | benign | -0.461 | Destabilizing | 0.349 | N | 0.401 | neutral | N | 0.492321203 | None | None | N |
V/M | 0.1711 | likely_benign | 0.1936 | benign | -0.432 | Destabilizing | 0.923 | D | 0.41 | neutral | None | None | None | None | N |
V/N | 0.3215 | likely_benign | 0.4266 | ambiguous | -0.737 | Destabilizing | 0.961 | D | 0.517 | neutral | None | None | None | None | N |
V/P | 0.7437 | likely_pathogenic | 0.7998 | pathogenic | -0.62 | Destabilizing | 0.961 | D | 0.496 | neutral | None | None | None | None | N |
V/Q | 0.2951 | likely_benign | 0.3727 | ambiguous | -0.917 | Destabilizing | 0.923 | D | 0.5 | neutral | None | None | None | None | N |
V/R | 0.3293 | likely_benign | 0.4869 | ambiguous | -0.391 | Destabilizing | 0.923 | D | 0.519 | neutral | None | None | None | None | N |
V/S | 0.2221 | likely_benign | 0.2892 | benign | -1.187 | Destabilizing | 0.633 | D | 0.419 | neutral | None | None | None | None | N |
V/T | 0.189 | likely_benign | 0.2495 | benign | -1.111 | Destabilizing | 0.775 | D | 0.307 | neutral | None | None | None | None | N |
V/W | 0.7923 | likely_pathogenic | 0.8529 | pathogenic | -0.959 | Destabilizing | 0.996 | D | 0.656 | neutral | None | None | None | None | N |
V/Y | 0.5656 | likely_pathogenic | 0.6583 | pathogenic | -0.677 | Destabilizing | 0.987 | D | 0.412 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.