Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6672 | 20239;20240;20241 | chr2:178727351;178727350;178727349 | chr2:179592078;179592077;179592076 |
N2AB | 6355 | 19288;19289;19290 | chr2:178727351;178727350;178727349 | chr2:179592078;179592077;179592076 |
N2A | 5428 | 16507;16508;16509 | chr2:178727351;178727350;178727349 | chr2:179592078;179592077;179592076 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/I | None | None | 0.216 | N | 0.718 | 0.172 | 0.407901774203 | gnomAD-4.0.0 | 1.62345E-06 | None | None | None | None | N | None | 0 | 0 | None | 4.9034E-05 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.682 | likely_pathogenic | 0.7682 | pathogenic | -0.425 | Destabilizing | 0.636 | D | 0.587 | neutral | None | None | None | None | N |
K/C | 0.9158 | likely_pathogenic | 0.9358 | pathogenic | -0.413 | Destabilizing | 0.993 | D | 0.73 | prob.delet. | None | None | None | None | N |
K/D | 0.837 | likely_pathogenic | 0.8843 | pathogenic | 0.186 | Stabilizing | 0.466 | N | 0.603 | neutral | None | None | None | None | N |
K/E | 0.464 | ambiguous | 0.611 | pathogenic | 0.282 | Stabilizing | 0.001 | N | 0.273 | neutral | N | 0.510176245 | None | None | N |
K/F | 0.9214 | likely_pathogenic | 0.9327 | pathogenic | -0.192 | Destabilizing | 0.938 | D | 0.708 | prob.delet. | None | None | None | None | N |
K/G | 0.7366 | likely_pathogenic | 0.8066 | pathogenic | -0.746 | Destabilizing | 0.636 | D | 0.577 | neutral | None | None | None | None | N |
K/H | 0.5264 | ambiguous | 0.5614 | ambiguous | -0.915 | Destabilizing | 0.951 | D | 0.679 | prob.neutral | None | None | None | None | N |
K/I | 0.6897 | likely_pathogenic | 0.7415 | pathogenic | 0.386 | Stabilizing | 0.216 | N | 0.718 | prob.delet. | N | 0.456972788 | None | None | N |
K/L | 0.632 | likely_pathogenic | 0.6811 | pathogenic | 0.386 | Stabilizing | 0.153 | N | 0.58 | neutral | None | None | None | None | N |
K/M | 0.4414 | ambiguous | 0.524 | ambiguous | 0.081 | Stabilizing | 0.945 | D | 0.673 | neutral | None | None | None | None | N |
K/N | 0.709 | likely_pathogenic | 0.7561 | pathogenic | -0.142 | Destabilizing | 0.822 | D | 0.594 | neutral | N | 0.457703123 | None | None | N |
K/P | 0.6155 | likely_pathogenic | 0.68 | pathogenic | 0.145 | Stabilizing | 0.925 | D | 0.676 | prob.neutral | None | None | None | None | N |
K/Q | 0.2553 | likely_benign | 0.3271 | benign | -0.177 | Destabilizing | 0.219 | N | 0.621 | neutral | N | 0.498825888 | None | None | N |
K/R | 0.1093 | likely_benign | 0.1106 | benign | -0.292 | Destabilizing | 0.001 | N | 0.22 | neutral | N | 0.504674424 | None | None | N |
K/S | 0.76 | likely_pathogenic | 0.8201 | pathogenic | -0.764 | Destabilizing | 0.636 | D | 0.587 | neutral | None | None | None | None | N |
K/T | 0.454 | ambiguous | 0.5529 | ambiguous | -0.47 | Destabilizing | 0.581 | D | 0.618 | neutral | N | 0.452249074 | None | None | N |
K/V | 0.6539 | likely_pathogenic | 0.7053 | pathogenic | 0.145 | Stabilizing | 0.192 | N | 0.63 | neutral | None | None | None | None | N |
K/W | 0.8976 | likely_pathogenic | 0.9136 | pathogenic | -0.112 | Destabilizing | 0.995 | D | 0.73 | prob.delet. | None | None | None | None | N |
K/Y | 0.8004 | likely_pathogenic | 0.8214 | pathogenic | 0.171 | Stabilizing | 0.638 | D | 0.717 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.