Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6674 | 20245;20246;20247 | chr2:178727345;178727344;178727343 | chr2:179592072;179592071;179592070 |
N2AB | 6357 | 19294;19295;19296 | chr2:178727345;178727344;178727343 | chr2:179592072;179592071;179592070 |
N2A | 5430 | 16513;16514;16515 | chr2:178727345;178727344;178727343 | chr2:179592072;179592071;179592070 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/Q | None | None | 0.763 | N | 0.428 | 0.205 | 0.245660935333 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.2144 | likely_benign | 0.2227 | benign | -0.448 | Destabilizing | 0.409 | N | 0.446 | neutral | N | 0.459339418 | None | None | N |
E/C | 0.9345 | likely_pathogenic | 0.9315 | pathogenic | -0.035 | Destabilizing | 0.987 | D | 0.662 | neutral | None | None | None | None | N |
E/D | 0.102 | likely_benign | 0.0853 | benign | -0.388 | Destabilizing | None | N | 0.101 | neutral | N | 0.486262022 | None | None | N |
E/F | 0.879 | likely_pathogenic | 0.8697 | pathogenic | -0.202 | Destabilizing | 0.974 | D | 0.611 | neutral | None | None | None | None | N |
E/G | 0.2488 | likely_benign | 0.2531 | benign | -0.674 | Destabilizing | 0.698 | D | 0.483 | neutral | N | 0.479089515 | None | None | N |
E/H | 0.651 | likely_pathogenic | 0.6632 | pathogenic | -0.066 | Destabilizing | 0.99 | D | 0.453 | neutral | None | None | None | None | N |
E/I | 0.5906 | likely_pathogenic | 0.5839 | pathogenic | 0.122 | Stabilizing | 0.85 | D | 0.595 | neutral | None | None | None | None | N |
E/K | 0.3578 | ambiguous | 0.3841 | ambiguous | 0.382 | Stabilizing | 0.562 | D | 0.417 | neutral | N | 0.494860076 | None | None | N |
E/L | 0.561 | ambiguous | 0.5438 | ambiguous | 0.122 | Stabilizing | 0.85 | D | 0.589 | neutral | None | None | None | None | N |
E/M | 0.697 | likely_pathogenic | 0.6958 | pathogenic | 0.276 | Stabilizing | 0.921 | D | 0.578 | neutral | None | None | None | None | N |
E/N | 0.3836 | ambiguous | 0.3555 | ambiguous | -0.093 | Destabilizing | 0.394 | N | 0.424 | neutral | None | None | None | None | N |
E/P | 0.4428 | ambiguous | 0.4137 | ambiguous | -0.047 | Destabilizing | None | N | 0.253 | neutral | None | None | None | None | N |
E/Q | 0.235 | likely_benign | 0.2566 | benign | -0.016 | Destabilizing | 0.763 | D | 0.428 | neutral | N | 0.484856513 | None | None | N |
E/R | 0.4845 | ambiguous | 0.5195 | ambiguous | 0.551 | Stabilizing | 0.924 | D | 0.455 | neutral | None | None | None | None | N |
E/S | 0.3109 | likely_benign | 0.2989 | benign | -0.227 | Destabilizing | 0.315 | N | 0.394 | neutral | None | None | None | None | N |
E/T | 0.3861 | ambiguous | 0.3808 | ambiguous | -0.027 | Destabilizing | 0.559 | D | 0.457 | neutral | None | None | None | None | N |
E/V | 0.3402 | ambiguous | 0.3441 | ambiguous | -0.047 | Destabilizing | 0.752 | D | 0.524 | neutral | N | 0.501135474 | None | None | N |
E/W | 0.948 | likely_pathogenic | 0.9502 | pathogenic | 0.002 | Stabilizing | 0.997 | D | 0.687 | prob.neutral | None | None | None | None | N |
E/Y | 0.7837 | likely_pathogenic | 0.7822 | pathogenic | 0.06 | Stabilizing | 0.99 | D | 0.562 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.