Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6675 | 20248;20249;20250 | chr2:178727342;178727341;178727340 | chr2:179592069;179592068;179592067 |
N2AB | 6358 | 19297;19298;19299 | chr2:178727342;178727341;178727340 | chr2:179592069;179592068;179592067 |
N2A | 5431 | 16516;16517;16518 | chr2:178727342;178727341;178727340 | chr2:179592069;179592068;179592067 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/D | None | None | 0.901 | N | 0.518 | 0.182 | 0.215869574891 | gnomAD-4.0.0 | 6.89045E-07 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.03599E-07 | 0 | 0 |
A/V | rs778363589 | 0.066 | 0.008 | N | 0.207 | 0.096 | 0.141422826196 | gnomAD-2.1.1 | 4.14E-06 | None | None | None | None | I | None | 0 | 3.01E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
A/V | rs778363589 | 0.066 | 0.008 | N | 0.207 | 0.096 | 0.141422826196 | gnomAD-4.0.0 | 6.89045E-07 | None | None | None | None | I | None | 0 | 2.30563E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.6642 | likely_pathogenic | 0.6959 | pathogenic | -0.72 | Destabilizing | 0.996 | D | 0.366 | neutral | None | None | None | None | I |
A/D | 0.2739 | likely_benign | 0.3634 | ambiguous | -0.364 | Destabilizing | 0.901 | D | 0.518 | neutral | N | 0.398810822 | None | None | I |
A/E | 0.2926 | likely_benign | 0.3792 | ambiguous | -0.525 | Destabilizing | 0.923 | D | 0.381 | neutral | None | None | None | None | I |
A/F | 0.3906 | ambiguous | 0.3966 | ambiguous | -0.856 | Destabilizing | 0.923 | D | 0.561 | neutral | None | None | None | None | I |
A/G | 0.1241 | likely_benign | 0.1266 | benign | -0.136 | Destabilizing | 0.722 | D | 0.308 | neutral | N | 0.43496641 | None | None | I |
A/H | 0.4993 | ambiguous | 0.5485 | ambiguous | -0.218 | Destabilizing | 0.996 | D | 0.557 | neutral | None | None | None | None | I |
A/I | 0.271 | likely_benign | 0.2594 | benign | -0.302 | Destabilizing | 0.372 | N | 0.424 | neutral | None | None | None | None | I |
A/K | 0.5467 | ambiguous | 0.6351 | pathogenic | -0.396 | Destabilizing | 0.923 | D | 0.376 | neutral | None | None | None | None | I |
A/L | 0.1904 | likely_benign | 0.1893 | benign | -0.302 | Destabilizing | 0.633 | D | 0.373 | neutral | None | None | None | None | I |
A/M | 0.255 | likely_benign | 0.2469 | benign | -0.352 | Destabilizing | 0.979 | D | 0.443 | neutral | None | None | None | None | I |
A/N | 0.192 | likely_benign | 0.2077 | benign | -0.116 | Destabilizing | 0.923 | D | 0.547 | neutral | None | None | None | None | I |
A/P | 0.0943 | likely_benign | 0.0996 | benign | -0.215 | Destabilizing | 0.018 | N | 0.225 | neutral | N | 0.366837263 | None | None | I |
A/Q | 0.3532 | ambiguous | 0.3944 | ambiguous | -0.395 | Destabilizing | 0.961 | D | 0.431 | neutral | None | None | None | None | I |
A/R | 0.5202 | ambiguous | 0.6068 | pathogenic | 0.013 | Stabilizing | 0.961 | D | 0.427 | neutral | None | None | None | None | I |
A/S | 0.0883 | likely_benign | 0.0909 | benign | -0.293 | Destabilizing | 0.565 | D | 0.383 | neutral | N | 0.371915009 | None | None | I |
A/T | 0.0887 | likely_benign | 0.0912 | benign | -0.379 | Destabilizing | 0.034 | N | 0.203 | neutral | N | 0.409299961 | None | None | I |
A/V | 0.1374 | likely_benign | 0.1332 | benign | -0.215 | Destabilizing | 0.008 | N | 0.207 | neutral | N | 0.482181567 | None | None | I |
A/W | 0.7822 | likely_pathogenic | 0.8132 | pathogenic | -0.977 | Destabilizing | 0.996 | D | 0.642 | neutral | None | None | None | None | I |
A/Y | 0.4952 | ambiguous | 0.5312 | ambiguous | -0.625 | Destabilizing | 0.961 | D | 0.563 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.