Isoform Positions

Isoform Protein Position Transcript Position Chromosomal Position (HG38) Chromosomal Position (HG19)
IC667520248;20249;20250 chr2:178727342;178727341;178727340chr2:179592069;179592068;179592067
N2AB635819297;19298;19299 chr2:178727342;178727341;178727340chr2:179592069;179592068;179592067
N2A543116516;16517;16518 chr2:178727342;178727341;178727340chr2:179592069;179592068;179592067
N2BNoneNone chr2:Nonechr2:None
Novex-1NoneNone chr2:Nonechr2:None
Novex-2NoneNone chr2:Nonechr2:None
Novex-3NoneNone chr2:Nonechr2:None

Information

  • RefSeq wild type amino acid: A
  • RefSeq wild type transcript codon: GCC
  • RefSeq wild type template codon: CGG
  • Domain: Ig-51
  • Domain position: 9
  • Structural Position: 11
  • Q(SASA): 0.5999
  • Predicted PPI site: I

Reported SAVs

SNV RS
DUET
PolyPhen-2
Condel
Rhapsody
REVEL
MVP
Source
MAF
Disease
Zygosity
Site annotation
mCSM PPI
Predicted PPI site
Comments
AFR
AMR
AMS
ASJ
EAS
EUR
FIN
MDE
NFE
SAS
OTH
A/D None None 0.901 N 0.518 0.182 0.215869574891 gnomAD-4.0.0 6.89045E-07 None None None None I None 0 0 None 0 0 None 0 0 9.03599E-07 0 0
A/V rs778363589 0.066 0.008 N 0.207 0.096 0.141422826196 gnomAD-2.1.1 4.14E-06 None None None None I None 0 3.01E-05 None 0 0 None 0 None 0 0 0
A/V rs778363589 0.066 0.008 N 0.207 0.096 0.141422826196 gnomAD-4.0.0 6.89045E-07 None None None None I None 0 2.30563E-05 None 0 0 None 0 0 0 0 0

Saturation Mutagenesis

SAV
AlphaMissense (IC)
AlphaMissense Class (IC)
AlphaMissense (N2AB)
AlphaMissense Class (N2AB)
mCSM
mCSM class
PolyPhen-2
PolyPhen-2 Class
Rhapsody
Rhapsody Class
Condel
Condel Score
Site annotation
mCSM PPI
Predicted PPI site
A/C 0.6642 likely_pathogenic 0.6959 pathogenic -0.72 Destabilizing 0.996 D 0.366 neutral None None None None I
A/D 0.2739 likely_benign 0.3634 ambiguous -0.364 Destabilizing 0.901 D 0.518 neutral N 0.398810822 None None I
A/E 0.2926 likely_benign 0.3792 ambiguous -0.525 Destabilizing 0.923 D 0.381 neutral None None None None I
A/F 0.3906 ambiguous 0.3966 ambiguous -0.856 Destabilizing 0.923 D 0.561 neutral None None None None I
A/G 0.1241 likely_benign 0.1266 benign -0.136 Destabilizing 0.722 D 0.308 neutral N 0.43496641 None None I
A/H 0.4993 ambiguous 0.5485 ambiguous -0.218 Destabilizing 0.996 D 0.557 neutral None None None None I
A/I 0.271 likely_benign 0.2594 benign -0.302 Destabilizing 0.372 N 0.424 neutral None None None None I
A/K 0.5467 ambiguous 0.6351 pathogenic -0.396 Destabilizing 0.923 D 0.376 neutral None None None None I
A/L 0.1904 likely_benign 0.1893 benign -0.302 Destabilizing 0.633 D 0.373 neutral None None None None I
A/M 0.255 likely_benign 0.2469 benign -0.352 Destabilizing 0.979 D 0.443 neutral None None None None I
A/N 0.192 likely_benign 0.2077 benign -0.116 Destabilizing 0.923 D 0.547 neutral None None None None I
A/P 0.0943 likely_benign 0.0996 benign -0.215 Destabilizing 0.018 N 0.225 neutral N 0.366837263 None None I
A/Q 0.3532 ambiguous 0.3944 ambiguous -0.395 Destabilizing 0.961 D 0.431 neutral None None None None I
A/R 0.5202 ambiguous 0.6068 pathogenic 0.013 Stabilizing 0.961 D 0.427 neutral None None None None I
A/S 0.0883 likely_benign 0.0909 benign -0.293 Destabilizing 0.565 D 0.383 neutral N 0.371915009 None None I
A/T 0.0887 likely_benign 0.0912 benign -0.379 Destabilizing 0.034 N 0.203 neutral N 0.409299961 None None I
A/V 0.1374 likely_benign 0.1332 benign -0.215 Destabilizing 0.008 N 0.207 neutral N 0.482181567 None None I
A/W 0.7822 likely_pathogenic 0.8132 pathogenic -0.977 Destabilizing 0.996 D 0.642 neutral None None None None I
A/Y 0.4952 ambiguous 0.5312 ambiguous -0.625 Destabilizing 0.961 D 0.563 neutral None None None None I

Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.