Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6679 | 20260;20261;20262 | chr2:178727330;178727329;178727328 | chr2:179592057;179592056;179592055 |
N2AB | 6362 | 19309;19310;19311 | chr2:178727330;178727329;178727328 | chr2:179592057;179592056;179592055 |
N2A | 5435 | 16528;16529;16530 | chr2:178727330;178727329;178727328 | chr2:179592057;179592056;179592055 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/E | None | None | 0.669 | D | 0.569 | 0.653 | 0.857261922848 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.75482E-04 | None | 0 | 0 | 0 | 0 | 0 |
V/L | None | None | 0.008 | N | 0.394 | 0.179 | 0.552492811922 | gnomAD-4.0.0 | 6.86256E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.0137E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.2929 | likely_benign | 0.3027 | benign | -1.767 | Destabilizing | 0.263 | N | 0.443 | neutral | D | 0.53379305 | None | None | N |
V/C | 0.7985 | likely_pathogenic | 0.8275 | pathogenic | -1.338 | Destabilizing | 0.987 | D | 0.514 | neutral | None | None | None | None | N |
V/D | 0.8569 | likely_pathogenic | 0.884 | pathogenic | -1.726 | Destabilizing | 0.943 | D | 0.619 | neutral | None | None | None | None | N |
V/E | 0.6713 | likely_pathogenic | 0.6995 | pathogenic | -1.651 | Destabilizing | 0.669 | D | 0.569 | neutral | D | 0.52448323 | None | None | N |
V/F | 0.218 | likely_benign | 0.278 | benign | -1.159 | Destabilizing | 0.86 | D | 0.553 | neutral | None | None | None | None | N |
V/G | 0.4755 | ambiguous | 0.4681 | ambiguous | -2.166 | Highly Destabilizing | 0.944 | D | 0.614 | neutral | N | 0.51583595 | None | None | N |
V/H | 0.8167 | likely_pathogenic | 0.8615 | pathogenic | -1.71 | Destabilizing | 0.99 | D | 0.587 | neutral | None | None | None | None | N |
V/I | 0.0797 | likely_benign | 0.086 | benign | -0.734 | Destabilizing | None | N | 0.236 | neutral | None | None | None | None | N |
V/K | 0.7394 | likely_pathogenic | 0.7771 | pathogenic | -1.571 | Destabilizing | 0.742 | D | 0.561 | neutral | None | None | None | None | N |
V/L | 0.1632 | likely_benign | 0.2376 | benign | -0.734 | Destabilizing | 0.008 | N | 0.394 | neutral | N | 0.51299649 | None | None | N |
V/M | 0.167 | likely_benign | 0.2021 | benign | -0.669 | Destabilizing | 0.063 | N | 0.421 | neutral | N | 0.521507489 | None | None | N |
V/N | 0.7164 | likely_pathogenic | 0.7537 | pathogenic | -1.512 | Destabilizing | 0.464 | N | 0.625 | neutral | None | None | None | None | N |
V/P | 0.9565 | likely_pathogenic | 0.9638 | pathogenic | -1.046 | Destabilizing | 0.725 | D | 0.562 | neutral | None | None | None | None | N |
V/Q | 0.5853 | likely_pathogenic | 0.6246 | pathogenic | -1.576 | Destabilizing | 0.805 | D | 0.567 | neutral | None | None | None | None | N |
V/R | 0.6583 | likely_pathogenic | 0.7126 | pathogenic | -1.133 | Destabilizing | 0.86 | D | 0.625 | neutral | None | None | None | None | N |
V/S | 0.4724 | ambiguous | 0.4865 | ambiguous | -2.11 | Highly Destabilizing | 0.768 | D | 0.557 | neutral | None | None | None | None | N |
V/T | 0.3518 | ambiguous | 0.3583 | ambiguous | -1.916 | Destabilizing | 0.276 | N | 0.535 | neutral | None | None | None | None | N |
V/W | 0.8853 | likely_pathogenic | 0.92 | pathogenic | -1.445 | Destabilizing | 0.997 | D | 0.554 | neutral | None | None | None | None | N |
V/Y | 0.6912 | likely_pathogenic | 0.7678 | pathogenic | -1.137 | Destabilizing | 0.926 | D | 0.541 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.