Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6684 | 20275;20276;20277 | chr2:178727315;178727314;178727313 | chr2:179592042;179592041;179592040 |
N2AB | 6367 | 19324;19325;19326 | chr2:178727315;178727314;178727313 | chr2:179592042;179592041;179592040 |
N2A | 5440 | 16543;16544;16545 | chr2:178727315;178727314;178727313 | chr2:179592042;179592041;179592040 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/Y | None | None | 0.999 | N | 0.706 | 0.376 | 0.503186968135 | gnomAD-4.0.0 | 1.59571E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86589E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.0772 | likely_benign | 0.0735 | benign | -0.507 | Destabilizing | 0.948 | D | 0.405 | neutral | N | 0.457061694 | None | None | N |
S/C | 0.1777 | likely_benign | 0.1727 | benign | -0.246 | Destabilizing | 1.0 | D | 0.631 | neutral | N | 0.501374506 | None | None | N |
S/D | 0.3549 | ambiguous | 0.3475 | ambiguous | -0.205 | Destabilizing | 0.992 | D | 0.482 | neutral | None | None | None | None | N |
S/E | 0.5063 | ambiguous | 0.5036 | ambiguous | -0.277 | Destabilizing | 0.992 | D | 0.471 | neutral | None | None | None | None | N |
S/F | 0.1296 | likely_benign | 0.1189 | benign | -1.03 | Destabilizing | 0.999 | D | 0.705 | prob.neutral | N | 0.501121017 | None | None | N |
S/G | 0.1135 | likely_benign | 0.1142 | benign | -0.66 | Destabilizing | 0.992 | D | 0.402 | neutral | None | None | None | None | N |
S/H | 0.3203 | likely_benign | 0.3209 | benign | -1.243 | Destabilizing | 1.0 | D | 0.623 | neutral | None | None | None | None | N |
S/I | 0.1597 | likely_benign | 0.1508 | benign | -0.223 | Destabilizing | 0.999 | D | 0.711 | prob.delet. | None | None | None | None | N |
S/K | 0.6539 | likely_pathogenic | 0.6697 | pathogenic | -0.52 | Destabilizing | 0.992 | D | 0.485 | neutral | None | None | None | None | N |
S/L | 0.1035 | likely_benign | 0.0996 | benign | -0.223 | Destabilizing | 0.998 | D | 0.617 | neutral | None | None | None | None | N |
S/M | 0.214 | likely_benign | 0.2102 | benign | 0.25 | Stabilizing | 1.0 | D | 0.621 | neutral | None | None | None | None | N |
S/N | 0.1462 | likely_benign | 0.1451 | benign | -0.315 | Destabilizing | 0.997 | D | 0.503 | neutral | None | None | None | None | N |
S/P | 0.1727 | likely_benign | 0.1688 | benign | -0.287 | Destabilizing | 0.121 | N | 0.272 | neutral | N | 0.455540757 | None | None | N |
S/Q | 0.4748 | ambiguous | 0.4823 | ambiguous | -0.619 | Destabilizing | 0.999 | D | 0.601 | neutral | None | None | None | None | N |
S/R | 0.5505 | ambiguous | 0.5762 | pathogenic | -0.29 | Destabilizing | 0.999 | D | 0.658 | neutral | None | None | None | None | N |
S/T | 0.0865 | likely_benign | 0.0831 | benign | -0.391 | Destabilizing | 0.989 | D | 0.395 | neutral | N | 0.470233777 | None | None | N |
S/V | 0.1583 | likely_benign | 0.1536 | benign | -0.287 | Destabilizing | 0.998 | D | 0.624 | neutral | None | None | None | None | N |
S/W | 0.3156 | likely_benign | 0.3139 | benign | -1.002 | Destabilizing | 1.0 | D | 0.735 | prob.delet. | None | None | None | None | N |
S/Y | 0.1432 | likely_benign | 0.1366 | benign | -0.727 | Destabilizing | 0.999 | D | 0.706 | prob.neutral | N | 0.478408406 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.