Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6687 | 20284;20285;20286 | chr2:178727306;178727305;178727304 | chr2:179592033;179592032;179592031 |
N2AB | 6370 | 19333;19334;19335 | chr2:178727306;178727305;178727304 | chr2:179592033;179592032;179592031 |
N2A | 5443 | 16552;16553;16554 | chr2:178727306;178727305;178727304 | chr2:179592033;179592032;179592031 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/V | rs2079507159 | None | 0.977 | D | 0.689 | 0.626 | 0.524792858863 | gnomAD-4.0.0 | 1.36953E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.79988E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.7617 | likely_pathogenic | 0.7495 | pathogenic | -2.855 | Highly Destabilizing | 0.966 | D | 0.723 | prob.delet. | None | None | None | None | N |
L/C | 0.804 | likely_pathogenic | 0.7944 | pathogenic | -1.999 | Destabilizing | 0.483 | N | 0.56 | neutral | None | None | None | None | N |
L/D | 0.9912 | likely_pathogenic | 0.9908 | pathogenic | -3.371 | Highly Destabilizing | 0.999 | D | 0.885 | deleterious | None | None | None | None | N |
L/E | 0.9416 | likely_pathogenic | 0.9407 | pathogenic | -3.126 | Highly Destabilizing | 0.999 | D | 0.872 | deleterious | None | None | None | None | N |
L/F | 0.0982 | likely_benign | 0.0938 | benign | -1.78 | Destabilizing | 0.999 | D | 0.818 | deleterious | N | 0.492135641 | None | None | N |
L/G | 0.9462 | likely_pathogenic | 0.9453 | pathogenic | -3.389 | Highly Destabilizing | 0.998 | D | 0.891 | deleterious | None | None | None | None | N |
L/H | 0.7545 | likely_pathogenic | 0.7382 | pathogenic | -2.646 | Highly Destabilizing | 1.0 | D | 0.865 | deleterious | D | 0.622184762 | None | None | N |
L/I | 0.1647 | likely_benign | 0.1493 | benign | -1.285 | Destabilizing | 0.977 | D | 0.652 | neutral | D | 0.544481043 | None | None | N |
L/K | 0.9303 | likely_pathogenic | 0.9269 | pathogenic | -2.359 | Highly Destabilizing | 0.999 | D | 0.875 | deleterious | None | None | None | None | N |
L/M | 0.1707 | likely_benign | 0.1539 | benign | -1.123 | Destabilizing | 0.999 | D | 0.756 | deleterious | None | None | None | None | N |
L/N | 0.9577 | likely_pathogenic | 0.9536 | pathogenic | -2.761 | Highly Destabilizing | 0.999 | D | 0.889 | deleterious | None | None | None | None | N |
L/P | 0.9847 | likely_pathogenic | 0.9862 | pathogenic | -1.794 | Destabilizing | 0.999 | D | 0.889 | deleterious | D | 0.605933236 | None | None | N |
L/Q | 0.752 | likely_pathogenic | 0.7323 | pathogenic | -2.644 | Highly Destabilizing | 0.999 | D | 0.867 | deleterious | None | None | None | None | N |
L/R | 0.8585 | likely_pathogenic | 0.8614 | pathogenic | -1.995 | Destabilizing | 0.999 | D | 0.859 | deleterious | D | 0.622184762 | None | None | N |
L/S | 0.9135 | likely_pathogenic | 0.9033 | pathogenic | -3.41 | Highly Destabilizing | 0.995 | D | 0.878 | deleterious | None | None | None | None | N |
L/T | 0.8182 | likely_pathogenic | 0.7989 | pathogenic | -3.021 | Highly Destabilizing | 0.995 | D | 0.824 | deleterious | None | None | None | None | N |
L/V | 0.2023 | likely_benign | 0.187 | benign | -1.794 | Destabilizing | 0.977 | D | 0.689 | prob.neutral | D | 0.567545706 | None | None | N |
L/W | 0.3385 | likely_benign | 0.3433 | ambiguous | -2.121 | Highly Destabilizing | 1.0 | D | 0.819 | deleterious | None | None | None | None | N |
L/Y | 0.4176 | ambiguous | 0.4257 | ambiguous | -1.87 | Destabilizing | 0.999 | D | 0.804 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.