Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6692 | 20299;20300;20301 | chr2:178727291;178727290;178727289 | chr2:179592018;179592017;179592016 |
N2AB | 6375 | 19348;19349;19350 | chr2:178727291;178727290;178727289 | chr2:179592018;179592017;179592016 |
N2A | 5448 | 16567;16568;16569 | chr2:178727291;178727290;178727289 | chr2:179592018;179592017;179592016 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/S | rs757056558 | None | None | N | 0.066 | 0.082 | 0.141422826196 | gnomAD-4.0.0 | 6.84548E-07 | None | None | None | None | N | None | 2.99133E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
A/T | rs757056558 | -0.613 | None | N | 0.065 | 0.067 | 0.200317383148 | gnomAD-2.1.1 | 1.21E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 9.31E-05 | 8.91E-06 | 0 |
A/T | rs757056558 | -0.613 | None | N | 0.065 | 0.067 | 0.200317383148 | gnomAD-4.0.0 | 8.21458E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 5.62219E-05 | 0 | 8.09808E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.4169 | ambiguous | 0.4476 | ambiguous | -0.86 | Destabilizing | 0.356 | N | 0.358 | neutral | None | None | None | None | N |
A/D | 0.3165 | likely_benign | 0.3445 | ambiguous | -0.673 | Destabilizing | 0.055 | N | 0.357 | neutral | N | 0.449056868 | None | None | N |
A/E | 0.2818 | likely_benign | 0.3055 | benign | -0.714 | Destabilizing | 0.038 | N | 0.335 | neutral | None | None | None | None | N |
A/F | 0.2507 | likely_benign | 0.2498 | benign | -0.666 | Destabilizing | 0.214 | N | 0.398 | neutral | None | None | None | None | N |
A/G | 0.1214 | likely_benign | 0.121 | benign | -0.77 | Destabilizing | 0.012 | N | 0.282 | neutral | N | 0.442477612 | None | None | N |
A/H | 0.3849 | ambiguous | 0.4174 | ambiguous | -0.771 | Destabilizing | 0.356 | N | 0.341 | neutral | None | None | None | None | N |
A/I | 0.1773 | likely_benign | 0.1756 | benign | -0.115 | Destabilizing | None | N | 0.205 | neutral | None | None | None | None | N |
A/K | 0.4082 | ambiguous | 0.4532 | ambiguous | -1.035 | Destabilizing | 0.038 | N | 0.337 | neutral | None | None | None | None | N |
A/L | 0.1234 | likely_benign | 0.1225 | benign | -0.115 | Destabilizing | None | N | 0.159 | neutral | None | None | None | None | N |
A/M | 0.1602 | likely_benign | 0.1654 | benign | -0.305 | Destabilizing | 0.214 | N | 0.327 | neutral | None | None | None | None | N |
A/N | 0.2067 | likely_benign | 0.2118 | benign | -0.816 | Destabilizing | 0.038 | N | 0.355 | neutral | None | None | None | None | N |
A/P | 0.54 | ambiguous | 0.5634 | ambiguous | -0.219 | Destabilizing | 0.106 | N | 0.369 | neutral | N | 0.515647219 | None | None | N |
A/Q | 0.3186 | likely_benign | 0.3391 | benign | -0.935 | Destabilizing | 0.214 | N | 0.371 | neutral | None | None | None | None | N |
A/R | 0.3331 | likely_benign | 0.3852 | ambiguous | -0.68 | Destabilizing | 0.072 | N | 0.393 | neutral | None | None | None | None | N |
A/S | 0.0743 | likely_benign | 0.0732 | benign | -1.146 | Destabilizing | None | N | 0.066 | neutral | N | 0.377828701 | None | None | N |
A/T | 0.0636 | likely_benign | 0.0629 | benign | -1.08 | Destabilizing | None | N | 0.065 | neutral | N | 0.41507758 | None | None | N |
A/V | 0.1176 | likely_benign | 0.1128 | benign | -0.219 | Destabilizing | 0.004 | N | 0.267 | neutral | N | 0.462602168 | None | None | N |
A/W | 0.5992 | likely_pathogenic | 0.646 | pathogenic | -0.975 | Destabilizing | 0.864 | D | 0.423 | neutral | None | None | None | None | N |
A/Y | 0.3776 | ambiguous | 0.4037 | ambiguous | -0.565 | Destabilizing | 0.356 | N | 0.369 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.