Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6694 | 20305;20306;20307 | chr2:178727285;178727284;178727283 | chr2:179592012;179592011;179592010 |
N2AB | 6377 | 19354;19355;19356 | chr2:178727285;178727284;178727283 | chr2:179592012;179592011;179592010 |
N2A | 5450 | 16573;16574;16575 | chr2:178727285;178727284;178727283 | chr2:179592012;179592011;179592010 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/F | rs774576049 | -0.861 | 0.299 | N | 0.46 | 0.324 | 0.579300295483 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.91E-06 | 0 |
S/Y | None | None | 0.99 | D | 0.673 | 0.511 | 0.679282971961 | gnomAD-4.0.0 | 4.10716E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.39858E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.1656 | likely_benign | 0.1307 | benign | -0.103 | Destabilizing | 0.325 | N | 0.455 | neutral | N | 0.487996961 | None | None | I |
S/C | 0.3192 | likely_benign | 0.301 | benign | -0.312 | Destabilizing | 0.999 | D | 0.545 | neutral | D | 0.536855677 | None | None | I |
S/D | 0.7556 | likely_pathogenic | 0.6909 | pathogenic | 0.011 | Stabilizing | 0.977 | D | 0.443 | neutral | None | None | None | None | I |
S/E | 0.8121 | likely_pathogenic | 0.7416 | pathogenic | -0.085 | Destabilizing | 0.983 | D | 0.453 | neutral | None | None | None | None | I |
S/F | 0.2715 | likely_benign | 0.1986 | benign | -0.762 | Destabilizing | 0.299 | N | 0.46 | neutral | N | 0.521573114 | None | None | I |
S/G | 0.2499 | likely_benign | 0.2291 | benign | -0.185 | Destabilizing | 0.987 | D | 0.405 | neutral | None | None | None | None | I |
S/H | 0.5517 | ambiguous | 0.4756 | ambiguous | -0.519 | Destabilizing | 1.0 | D | 0.518 | neutral | None | None | None | None | I |
S/I | 0.3188 | likely_benign | 0.2157 | benign | -0.022 | Destabilizing | 0.993 | D | 0.619 | neutral | None | None | None | None | I |
S/K | 0.8841 | likely_pathogenic | 0.818 | pathogenic | -0.428 | Destabilizing | 0.987 | D | 0.446 | neutral | None | None | None | None | I |
S/L | 0.1589 | likely_benign | 0.1151 | benign | -0.022 | Destabilizing | 0.975 | D | 0.598 | neutral | None | None | None | None | I |
S/M | 0.3168 | likely_benign | 0.2584 | benign | -0.086 | Destabilizing | 1.0 | D | 0.519 | neutral | None | None | None | None | I |
S/N | 0.323 | likely_benign | 0.2475 | benign | -0.129 | Destabilizing | 0.832 | D | 0.481 | neutral | None | None | None | None | I |
S/P | 0.8166 | likely_pathogenic | 0.7833 | pathogenic | -0.022 | Destabilizing | 0.997 | D | 0.513 | neutral | N | 0.507395117 | None | None | I |
S/Q | 0.7379 | likely_pathogenic | 0.6497 | pathogenic | -0.346 | Destabilizing | 0.999 | D | 0.447 | neutral | None | None | None | None | I |
S/R | 0.8492 | likely_pathogenic | 0.7623 | pathogenic | -0.163 | Destabilizing | 0.998 | D | 0.507 | neutral | None | None | None | None | I |
S/T | 0.097 | likely_benign | 0.0936 | benign | -0.211 | Destabilizing | 0.01 | N | 0.201 | neutral | N | 0.505198152 | None | None | I |
S/V | 0.3318 | likely_benign | 0.2342 | benign | -0.022 | Destabilizing | 0.967 | D | 0.635 | neutral | None | None | None | None | I |
S/W | 0.5216 | ambiguous | 0.4626 | ambiguous | -0.861 | Destabilizing | 1.0 | D | 0.723 | prob.delet. | None | None | None | None | I |
S/Y | 0.2628 | likely_benign | 0.2088 | benign | -0.539 | Destabilizing | 0.99 | D | 0.673 | neutral | D | 0.526960291 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.