Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6696 | 20311;20312;20313 | chr2:178727279;178727278;178727277 | chr2:179592006;179592005;179592004 |
N2AB | 6379 | 19360;19361;19362 | chr2:178727279;178727278;178727277 | chr2:179592006;179592005;179592004 |
N2A | 5452 | 16579;16580;16581 | chr2:178727279;178727278;178727277 | chr2:179592006;179592005;179592004 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | rs764124148 | -0.14 | 0.008 | N | 0.419 | 0.272 | 0.294918367191 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 5.58E-05 | None | 0 | None | 0 | 0 | 0 |
E/A | rs764124148 | -0.14 | 0.008 | N | 0.419 | 0.272 | 0.294918367191 | gnomAD-4.0.0 | 1.5928E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 2.77593E-05 | None | 0 | 0 | 0 | 0 | 0 |
E/G | rs764124148 | -0.504 | 0.063 | N | 0.459 | 0.312 | 0.35139820857 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | I | None | 0 | 2.91E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
E/G | rs764124148 | -0.504 | 0.063 | N | 0.459 | 0.312 | 0.35139820857 | gnomAD-4.0.0 | 3.18561E-06 | None | None | None | None | I | None | 0 | 4.57959E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1339 | likely_benign | 0.1464 | benign | -0.125 | Destabilizing | 0.008 | N | 0.419 | neutral | N | 0.514839143 | None | None | I |
E/C | 0.8468 | likely_pathogenic | 0.8843 | pathogenic | -0.273 | Destabilizing | 0.685 | D | 0.461 | neutral | None | None | None | None | I |
E/D | 0.0839 | likely_benign | 0.0866 | benign | -0.309 | Destabilizing | None | N | 0.191 | neutral | N | 0.482832401 | None | None | I |
E/F | 0.7538 | likely_pathogenic | 0.7955 | pathogenic | -0.041 | Destabilizing | 0.26 | N | 0.453 | neutral | None | None | None | None | I |
E/G | 0.1812 | likely_benign | 0.1917 | benign | -0.275 | Destabilizing | 0.063 | N | 0.459 | neutral | N | 0.493938898 | None | None | I |
E/H | 0.413 | ambiguous | 0.4767 | ambiguous | 0.554 | Stabilizing | 0.201 | N | 0.335 | neutral | None | None | None | None | I |
E/I | 0.3727 | ambiguous | 0.407 | ambiguous | 0.223 | Stabilizing | 0.011 | N | 0.449 | neutral | None | None | None | None | I |
E/K | 0.1546 | likely_benign | 0.1875 | benign | 0.342 | Stabilizing | 0.036 | N | 0.321 | neutral | N | 0.516127222 | None | None | I |
E/L | 0.3895 | ambiguous | 0.4324 | ambiguous | 0.223 | Stabilizing | 0.011 | N | 0.461 | neutral | None | None | None | None | I |
E/M | 0.507 | ambiguous | 0.5454 | ambiguous | -0.011 | Destabilizing | 0.029 | N | 0.438 | neutral | None | None | None | None | I |
E/N | 0.1796 | likely_benign | 0.2097 | benign | 0.005 | Stabilizing | 0.005 | N | 0.34 | neutral | None | None | None | None | I |
E/P | 0.2874 | likely_benign | 0.3058 | benign | 0.126 | Stabilizing | None | N | 0.171 | neutral | None | None | None | None | I |
E/Q | 0.1395 | likely_benign | 0.1564 | benign | 0.039 | Stabilizing | 0.026 | N | 0.364 | neutral | N | 0.485541426 | None | None | I |
E/R | 0.2494 | likely_benign | 0.2947 | benign | 0.654 | Stabilizing | 0.148 | N | 0.345 | neutral | None | None | None | None | I |
E/S | 0.1712 | likely_benign | 0.1882 | benign | -0.137 | Destabilizing | 0.013 | N | 0.299 | neutral | None | None | None | None | I |
E/T | 0.2471 | likely_benign | 0.274 | benign | -0.005 | Destabilizing | 0.036 | N | 0.41 | neutral | None | None | None | None | I |
E/V | 0.2126 | likely_benign | 0.2284 | benign | 0.126 | Stabilizing | None | N | 0.341 | neutral | N | 0.50987604 | None | None | I |
E/W | 0.9026 | likely_pathogenic | 0.925 | pathogenic | 0.056 | Stabilizing | 0.915 | D | 0.534 | neutral | None | None | None | None | I |
E/Y | 0.5824 | likely_pathogenic | 0.6468 | pathogenic | 0.193 | Stabilizing | 0.741 | D | 0.445 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.