Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6700 | 20323;20324;20325 | chr2:178727267;178727266;178727265 | chr2:179591994;179591993;179591992 |
N2AB | 6383 | 19372;19373;19374 | chr2:178727267;178727266;178727265 | chr2:179591994;179591993;179591992 |
N2A | 5456 | 16591;16592;16593 | chr2:178727267;178727266;178727265 | chr2:179591994;179591993;179591992 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | rs367635778 | None | 0.005 | N | 0.322 | 0.074 | 0.468753983522 | gnomAD-3.1.2 | 2.63E-05 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 5.88E-05 | 0 | 0 |
V/A | rs367635778 | None | 0.005 | N | 0.322 | 0.074 | 0.468753983522 | gnomAD-4.0.0 | 3.7196E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.08718E-06 | 0 | 0 |
V/L | rs72648957 | -0.336 | 0.004 | N | 0.368 | 0.114 | 0.326074293725 | gnomAD-4.0.0 | 1.5928E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.861E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.0971 | likely_benign | 0.1082 | benign | -1.677 | Destabilizing | 0.005 | N | 0.322 | neutral | N | 0.474240527 | None | None | N |
V/C | 0.6104 | likely_pathogenic | 0.6134 | pathogenic | -0.868 | Destabilizing | 0.676 | D | 0.521 | neutral | None | None | None | None | N |
V/D | 0.2106 | likely_benign | 0.2293 | benign | -2.025 | Highly Destabilizing | 0.072 | N | 0.558 | neutral | None | None | None | None | N |
V/E | 0.1507 | likely_benign | 0.1727 | benign | -1.902 | Destabilizing | 0.024 | N | 0.495 | neutral | N | 0.464330178 | None | None | N |
V/F | 0.1054 | likely_benign | 0.1105 | benign | -1.061 | Destabilizing | 0.214 | N | 0.556 | neutral | None | None | None | None | N |
V/G | 0.1425 | likely_benign | 0.1498 | benign | -2.101 | Highly Destabilizing | None | N | 0.458 | neutral | N | 0.517300658 | None | None | N |
V/H | 0.2344 | likely_benign | 0.2658 | benign | -1.807 | Destabilizing | 0.356 | N | 0.565 | neutral | None | None | None | None | N |
V/I | 0.0754 | likely_benign | 0.0754 | benign | -0.545 | Destabilizing | 0.016 | N | 0.435 | neutral | None | None | None | None | N |
V/K | 0.1114 | likely_benign | 0.1367 | benign | -1.4 | Destabilizing | 0.001 | N | 0.384 | neutral | None | None | None | None | N |
V/L | 0.108 | likely_benign | 0.1152 | benign | -0.545 | Destabilizing | 0.004 | N | 0.368 | neutral | N | 0.440976102 | None | None | N |
V/M | 0.0903 | likely_benign | 0.0973 | benign | -0.349 | Destabilizing | 0.002 | N | 0.348 | neutral | N | 0.506603662 | None | None | N |
V/N | 0.1316 | likely_benign | 0.1433 | benign | -1.399 | Destabilizing | 0.072 | N | 0.558 | neutral | None | None | None | None | N |
V/P | 0.8537 | likely_pathogenic | 0.8786 | pathogenic | -0.893 | Destabilizing | 0.136 | N | 0.586 | neutral | None | None | None | None | N |
V/Q | 0.1244 | likely_benign | 0.1438 | benign | -1.414 | Destabilizing | 0.072 | N | 0.588 | neutral | None | None | None | None | N |
V/R | 0.092 | likely_benign | 0.1096 | benign | -1.044 | Destabilizing | None | N | 0.469 | neutral | None | None | None | None | N |
V/S | 0.0906 | likely_benign | 0.099 | benign | -1.919 | Destabilizing | 0.001 | N | 0.382 | neutral | None | None | None | None | N |
V/T | 0.0844 | likely_benign | 0.0944 | benign | -1.686 | Destabilizing | None | N | 0.241 | neutral | None | None | None | None | N |
V/W | 0.5397 | ambiguous | 0.5833 | pathogenic | -1.51 | Destabilizing | 0.864 | D | 0.583 | neutral | None | None | None | None | N |
V/Y | 0.3301 | likely_benign | 0.3527 | ambiguous | -1.125 | Destabilizing | 0.356 | N | 0.542 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.