Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6701 | 20326;20327;20328 | chr2:178727264;178727263;178727262 | chr2:179591991;179591990;179591989 |
N2AB | 6384 | 19375;19376;19377 | chr2:178727264;178727263;178727262 | chr2:179591991;179591990;179591989 |
N2A | 5457 | 16594;16595;16596 | chr2:178727264;178727263;178727262 | chr2:179591991;179591990;179591989 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
W/C | None | None | 1.0 | D | 0.777 | 0.734 | 0.88842533597 | gnomAD-4.0.0 | 1.59267E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43361E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
W/A | 0.9874 | likely_pathogenic | 0.991 | pathogenic | -3.014 | Highly Destabilizing | 1.0 | D | 0.833 | deleterious | None | None | None | None | N |
W/C | 0.9947 | likely_pathogenic | 0.9953 | pathogenic | -1.672 | Destabilizing | 1.0 | D | 0.777 | deleterious | D | 0.706780086 | None | None | N |
W/D | 0.9993 | likely_pathogenic | 0.9995 | pathogenic | -3.31 | Highly Destabilizing | 1.0 | D | 0.859 | deleterious | None | None | None | None | N |
W/E | 0.9992 | likely_pathogenic | 0.9994 | pathogenic | -3.201 | Highly Destabilizing | 1.0 | D | 0.833 | deleterious | None | None | None | None | N |
W/F | 0.5434 | ambiguous | 0.6186 | pathogenic | -1.814 | Destabilizing | 1.0 | D | 0.831 | deleterious | None | None | None | None | N |
W/G | 0.9658 | likely_pathogenic | 0.9731 | pathogenic | -3.244 | Highly Destabilizing | 1.0 | D | 0.804 | deleterious | D | 0.706578282 | None | None | N |
W/H | 0.9947 | likely_pathogenic | 0.9965 | pathogenic | -2.064 | Highly Destabilizing | 1.0 | D | 0.815 | deleterious | None | None | None | None | N |
W/I | 0.9579 | likely_pathogenic | 0.9686 | pathogenic | -2.135 | Highly Destabilizing | 1.0 | D | 0.848 | deleterious | None | None | None | None | N |
W/K | 0.9995 | likely_pathogenic | 0.9997 | pathogenic | -2.429 | Highly Destabilizing | 1.0 | D | 0.83 | deleterious | None | None | None | None | N |
W/L | 0.8767 | likely_pathogenic | 0.8908 | pathogenic | -2.135 | Highly Destabilizing | 1.0 | D | 0.804 | deleterious | D | 0.690558921 | None | None | N |
W/M | 0.9806 | likely_pathogenic | 0.9847 | pathogenic | -1.574 | Destabilizing | 1.0 | D | 0.777 | deleterious | None | None | None | None | N |
W/N | 0.9984 | likely_pathogenic | 0.999 | pathogenic | -3.134 | Highly Destabilizing | 1.0 | D | 0.864 | deleterious | None | None | None | None | N |
W/P | 0.9966 | likely_pathogenic | 0.9977 | pathogenic | -2.456 | Highly Destabilizing | 1.0 | D | 0.867 | deleterious | None | None | None | None | N |
W/Q | 0.9992 | likely_pathogenic | 0.9995 | pathogenic | -2.989 | Highly Destabilizing | 1.0 | D | 0.843 | deleterious | None | None | None | None | N |
W/R | 0.9985 | likely_pathogenic | 0.9991 | pathogenic | -2.128 | Highly Destabilizing | 1.0 | D | 0.858 | deleterious | D | 0.706780086 | None | None | N |
W/S | 0.9849 | likely_pathogenic | 0.9897 | pathogenic | -3.279 | Highly Destabilizing | 1.0 | D | 0.835 | deleterious | D | 0.706780086 | None | None | N |
W/T | 0.9883 | likely_pathogenic | 0.9917 | pathogenic | -3.104 | Highly Destabilizing | 1.0 | D | 0.815 | deleterious | None | None | None | None | N |
W/V | 0.9617 | likely_pathogenic | 0.9692 | pathogenic | -2.456 | Highly Destabilizing | 1.0 | D | 0.834 | deleterious | None | None | None | None | N |
W/Y | 0.8967 | likely_pathogenic | 0.9219 | pathogenic | -1.673 | Destabilizing | 1.0 | D | 0.795 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.