Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6706 | 20341;20342;20343 | chr2:178727249;178727248;178727247 | chr2:179591976;179591975;179591974 |
N2AB | 6389 | 19390;19391;19392 | chr2:178727249;178727248;178727247 | chr2:179591976;179591975;179591974 |
N2A | 5462 | 16609;16610;16611 | chr2:178727249;178727248;178727247 | chr2:179591976;179591975;179591974 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/Q | None | None | 0.002 | N | 0.145 | 0.092 | 0.0884992946249 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/A | 0.1328 | likely_benign | 0.1383 | benign | 0.261 | Stabilizing | 0.001 | N | 0.142 | neutral | None | None | None | None | N |
H/C | 0.1694 | likely_benign | 0.1626 | benign | 0.796 | Stabilizing | 0.901 | D | 0.347 | neutral | None | None | None | None | N |
H/D | 0.111 | likely_benign | 0.1168 | benign | -0.213 | Destabilizing | 0.061 | N | 0.339 | neutral | N | 0.459599149 | None | None | N |
H/E | 0.1251 | likely_benign | 0.1227 | benign | -0.162 | Destabilizing | 0.036 | N | 0.187 | neutral | None | None | None | None | N |
H/F | 0.2229 | likely_benign | 0.2204 | benign | 1.173 | Stabilizing | 0.296 | N | 0.376 | neutral | None | None | None | None | N |
H/G | 0.1802 | likely_benign | 0.199 | benign | -0.054 | Destabilizing | 0.08 | N | 0.291 | neutral | None | None | None | None | N |
H/I | 0.1629 | likely_benign | 0.1528 | benign | 1.085 | Stabilizing | 0.174 | N | 0.461 | neutral | None | None | None | None | N |
H/K | 0.1135 | likely_benign | 0.1133 | benign | 0.243 | Stabilizing | 0.036 | N | 0.289 | neutral | None | None | None | None | N |
H/L | 0.0875 | likely_benign | 0.0875 | benign | 1.085 | Stabilizing | 0.028 | N | 0.351 | neutral | N | 0.441186746 | None | None | N |
H/M | 0.2457 | likely_benign | 0.2423 | benign | 0.772 | Stabilizing | 0.016 | N | 0.245 | neutral | None | None | None | None | N |
H/N | 0.059 | likely_benign | 0.0603 | benign | 0.139 | Stabilizing | 0.002 | N | 0.139 | neutral | N | 0.407882249 | None | None | N |
H/P | 0.3836 | ambiguous | 0.4921 | ambiguous | 0.835 | Stabilizing | 0.391 | N | 0.417 | neutral | N | 0.4699895 | None | None | N |
H/Q | 0.0774 | likely_benign | 0.0767 | benign | 0.297 | Stabilizing | 0.002 | N | 0.145 | neutral | N | 0.414152073 | None | None | N |
H/R | 0.0628 | likely_benign | 0.0628 | benign | -0.457 | Destabilizing | None | N | 0.123 | neutral | N | 0.386794901 | None | None | N |
H/S | 0.118 | likely_benign | 0.1259 | benign | 0.32 | Stabilizing | 0.036 | N | 0.287 | neutral | None | None | None | None | N |
H/T | 0.1078 | likely_benign | 0.1124 | benign | 0.474 | Stabilizing | 0.002 | N | 0.18 | neutral | None | None | None | None | N |
H/V | 0.1291 | likely_benign | 0.1224 | benign | 0.835 | Stabilizing | 0.08 | N | 0.303 | neutral | None | None | None | None | N |
H/W | 0.2985 | likely_benign | 0.3104 | benign | 1.219 | Stabilizing | 0.972 | D | 0.339 | neutral | None | None | None | None | N |
H/Y | 0.0848 | likely_benign | 0.0861 | benign | 1.415 | Stabilizing | 0.391 | N | 0.282 | neutral | N | 0.474203242 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.