Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6707 | 20344;20345;20346 | chr2:178727246;178727245;178727244 | chr2:179591973;179591972;179591971 |
N2AB | 6390 | 19393;19394;19395 | chr2:178727246;178727245;178727244 | chr2:179591973;179591972;179591971 |
N2A | 5463 | 16612;16613;16614 | chr2:178727246;178727245;178727244 | chr2:179591973;179591972;179591971 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | rs2079497465 | None | 0.14 | N | 0.198 | 0.292 | 0.30212335484 | gnomAD-4.0.0 | 1.59256E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 3.02755E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1328 | likely_benign | 0.1392 | benign | -0.517 | Destabilizing | 0.868 | D | 0.395 | neutral | N | 0.491581813 | None | None | N |
E/C | 0.8509 | likely_pathogenic | 0.8437 | pathogenic | -0.454 | Destabilizing | 0.999 | D | 0.639 | neutral | None | None | None | None | N |
E/D | 0.2881 | likely_benign | 0.3018 | benign | -0.661 | Destabilizing | 0.632 | D | 0.393 | neutral | N | 0.485541426 | None | None | N |
E/F | 0.7364 | likely_pathogenic | 0.758 | pathogenic | 0.132 | Stabilizing | 0.991 | D | 0.597 | neutral | None | None | None | None | N |
E/G | 0.2312 | likely_benign | 0.2498 | benign | -0.821 | Destabilizing | 0.064 | N | 0.248 | neutral | D | 0.536081207 | None | None | N |
E/H | 0.464 | ambiguous | 0.4922 | ambiguous | 0.356 | Stabilizing | 0.999 | D | 0.446 | neutral | None | None | None | None | N |
E/I | 0.2655 | likely_benign | 0.2675 | benign | 0.292 | Stabilizing | 0.19 | N | 0.367 | neutral | None | None | None | None | N |
E/K | 0.1004 | likely_benign | 0.1147 | benign | -0.106 | Destabilizing | 0.14 | N | 0.198 | neutral | N | 0.484135847 | None | None | N |
E/L | 0.2959 | likely_benign | 0.3019 | benign | 0.292 | Stabilizing | 0.791 | D | 0.464 | neutral | None | None | None | None | N |
E/M | 0.3654 | ambiguous | 0.3766 | ambiguous | 0.299 | Stabilizing | 0.973 | D | 0.572 | neutral | None | None | None | None | N |
E/N | 0.3834 | ambiguous | 0.4207 | ambiguous | -0.753 | Destabilizing | 0.961 | D | 0.4 | neutral | None | None | None | None | N |
E/P | 0.307 | likely_benign | 0.3221 | benign | 0.043 | Stabilizing | 0.96 | D | 0.494 | neutral | None | None | None | None | N |
E/Q | 0.1037 | likely_benign | 0.1085 | benign | -0.622 | Destabilizing | 0.968 | D | 0.435 | neutral | N | 0.497911689 | None | None | N |
E/R | 0.1859 | likely_benign | 0.2044 | benign | 0.336 | Stabilizing | 0.966 | D | 0.4 | neutral | None | None | None | None | N |
E/S | 0.2254 | likely_benign | 0.2455 | benign | -0.942 | Destabilizing | 0.897 | D | 0.363 | neutral | None | None | None | None | N |
E/T | 0.2365 | likely_benign | 0.2568 | benign | -0.68 | Destabilizing | 0.961 | D | 0.444 | neutral | None | None | None | None | N |
E/V | 0.1706 | likely_benign | 0.1719 | benign | 0.043 | Stabilizing | 0.669 | D | 0.443 | neutral | N | 0.496052038 | None | None | N |
E/W | 0.9233 | likely_pathogenic | 0.9342 | pathogenic | 0.413 | Stabilizing | 1.0 | D | 0.679 | prob.neutral | None | None | None | None | N |
E/Y | 0.6357 | likely_pathogenic | 0.6619 | pathogenic | 0.401 | Stabilizing | 0.999 | D | 0.575 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.