Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6709 | 20350;20351;20352 | chr2:178727240;178727239;178727238 | chr2:179591967;179591966;179591965 |
N2AB | 6392 | 19399;19400;19401 | chr2:178727240;178727239;178727238 | chr2:179591967;179591966;179591965 |
N2A | 5465 | 16618;16619;16620 | chr2:178727240;178727239;178727238 | chr2:179591967;179591966;179591965 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/S | None | None | None | N | 0.147 | 0.126 | 0.0920862733494 | gnomAD-4.0.0 | 3.18517E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86082E-06 | 0 | 3.02682E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.0583 | likely_benign | 0.0562 | benign | -0.472 | Destabilizing | 0.001 | N | 0.26 | neutral | N | 0.486745677 | None | None | N |
P/C | 0.2416 | likely_benign | 0.2872 | benign | -0.657 | Destabilizing | 0.245 | N | 0.417 | neutral | None | None | None | None | N |
P/D | 0.1939 | likely_benign | 0.213 | benign | -0.284 | Destabilizing | 0.018 | N | 0.339 | neutral | None | None | None | None | N |
P/E | 0.1194 | likely_benign | 0.1264 | benign | -0.37 | Destabilizing | 0.004 | N | 0.308 | neutral | None | None | None | None | N |
P/F | 0.1607 | likely_benign | 0.1657 | benign | -0.629 | Destabilizing | 0.044 | N | 0.469 | neutral | None | None | None | None | N |
P/G | 0.1436 | likely_benign | 0.1519 | benign | -0.619 | Destabilizing | 0.004 | N | 0.312 | neutral | None | None | None | None | N |
P/H | 0.0735 | likely_benign | 0.0829 | benign | -0.16 | Destabilizing | None | N | 0.249 | neutral | None | None | None | None | N |
P/I | 0.1144 | likely_benign | 0.1083 | benign | -0.22 | Destabilizing | 0.009 | N | 0.391 | neutral | None | None | None | None | N |
P/K | 0.0993 | likely_benign | 0.1063 | benign | -0.45 | Destabilizing | None | N | 0.178 | neutral | None | None | None | None | N |
P/L | 0.062 | likely_benign | 0.0592 | benign | -0.22 | Destabilizing | 0.003 | N | 0.301 | neutral | N | 0.459311147 | None | None | N |
P/M | 0.1348 | likely_benign | 0.1265 | benign | -0.445 | Destabilizing | 0.002 | N | 0.254 | neutral | None | None | None | None | N |
P/N | 0.1282 | likely_benign | 0.1363 | benign | -0.237 | Destabilizing | 0.009 | N | 0.369 | neutral | None | None | None | None | N |
P/Q | 0.0707 | likely_benign | 0.0738 | benign | -0.418 | Destabilizing | None | N | 0.156 | neutral | N | 0.429814959 | None | None | N |
P/R | 0.075 | likely_benign | 0.0814 | benign | 0.002 | Stabilizing | 0.007 | N | 0.364 | neutral | N | 0.447245927 | None | None | N |
P/S | 0.0717 | likely_benign | 0.0717 | benign | -0.595 | Destabilizing | None | N | 0.147 | neutral | N | 0.450574234 | None | None | N |
P/T | 0.0619 | likely_benign | 0.0602 | benign | -0.573 | Destabilizing | None | N | 0.149 | neutral | N | 0.465100969 | None | None | N |
P/V | 0.0973 | likely_benign | 0.0928 | benign | -0.271 | Destabilizing | None | N | 0.181 | neutral | None | None | None | None | N |
P/W | 0.241 | likely_benign | 0.2728 | benign | -0.733 | Destabilizing | 0.788 | D | 0.406 | neutral | None | None | None | None | N |
P/Y | 0.1541 | likely_benign | 0.1728 | benign | -0.431 | Destabilizing | 0.044 | N | 0.504 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.