Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6712 | 20359;20360;20361 | chr2:178727231;178727230;178727229 | chr2:179591958;179591957;179591956 |
N2AB | 6395 | 19408;19409;19410 | chr2:178727231;178727230;178727229 | chr2:179591958;179591957;179591956 |
N2A | 5468 | 16627;16628;16629 | chr2:178727231;178727230;178727229 | chr2:179591958;179591957;179591956 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/E | None | None | None | N | 0.132 | 0.082 | 0.101711395817 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.111 | likely_benign | 0.116 | benign | -0.041 | Destabilizing | None | N | 0.145 | neutral | N | 0.469023056 | None | None | N |
D/C | 0.4981 | ambiguous | 0.5159 | ambiguous | 0.144 | Stabilizing | 0.864 | D | 0.221 | neutral | None | None | None | None | N |
D/E | 0.0784 | likely_benign | 0.0759 | benign | -0.16 | Destabilizing | None | N | 0.132 | neutral | N | 0.429291231 | None | None | N |
D/F | 0.4467 | ambiguous | 0.4543 | ambiguous | -0.184 | Destabilizing | 0.628 | D | 0.237 | neutral | None | None | None | None | N |
D/G | 0.0989 | likely_benign | 0.106 | benign | -0.164 | Destabilizing | None | N | 0.123 | neutral | N | 0.463075731 | None | None | N |
D/H | 0.1589 | likely_benign | 0.172 | benign | 0.182 | Stabilizing | 0.295 | N | 0.227 | neutral | N | 0.500327397 | None | None | N |
D/I | 0.2542 | likely_benign | 0.2569 | benign | 0.213 | Stabilizing | 0.356 | N | 0.292 | neutral | None | None | None | None | N |
D/K | 0.1512 | likely_benign | 0.1711 | benign | 0.522 | Stabilizing | 0.016 | N | 0.309 | neutral | None | None | None | None | N |
D/L | 0.2347 | likely_benign | 0.2508 | benign | 0.213 | Stabilizing | 0.072 | N | 0.301 | neutral | None | None | None | None | N |
D/M | 0.4199 | ambiguous | 0.4252 | ambiguous | 0.23 | Stabilizing | 0.628 | D | 0.222 | neutral | None | None | None | None | N |
D/N | 0.0808 | likely_benign | 0.0834 | benign | 0.373 | Stabilizing | 0.055 | N | 0.222 | neutral | N | 0.458248701 | None | None | N |
D/P | 0.2775 | likely_benign | 0.3065 | benign | 0.148 | Stabilizing | None | N | 0.173 | neutral | None | None | None | None | N |
D/Q | 0.1493 | likely_benign | 0.1619 | benign | 0.37 | Stabilizing | 0.038 | N | 0.25 | neutral | None | None | None | None | N |
D/R | 0.1829 | likely_benign | 0.2047 | benign | 0.627 | Stabilizing | 0.038 | N | 0.295 | neutral | None | None | None | None | N |
D/S | 0.0846 | likely_benign | 0.0903 | benign | 0.262 | Stabilizing | 0.016 | N | 0.233 | neutral | None | None | None | None | N |
D/T | 0.1623 | likely_benign | 0.1672 | benign | 0.357 | Stabilizing | 0.072 | N | 0.31 | neutral | None | None | None | None | N |
D/V | 0.1593 | likely_benign | 0.1607 | benign | 0.148 | Stabilizing | 0.055 | N | 0.314 | neutral | N | 0.495825655 | None | None | N |
D/W | 0.6877 | likely_pathogenic | 0.7051 | pathogenic | -0.147 | Destabilizing | 0.864 | D | 0.235 | neutral | None | None | None | None | N |
D/Y | 0.1797 | likely_benign | 0.1959 | benign | 0.037 | Stabilizing | 0.56 | D | 0.235 | neutral | N | 0.46988603 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.