Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6717 | 20374;20375;20376 | chr2:178727216;178727215;178727214 | chr2:179591943;179591942;179591941 |
N2AB | 6400 | 19423;19424;19425 | chr2:178727216;178727215;178727214 | chr2:179591943;179591942;179591941 |
N2A | 5473 | 16642;16643;16644 | chr2:178727216;178727215;178727214 | chr2:179591943;179591942;179591941 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | None | None | 0.117 | N | 0.369 | 0.246 | 0.473774312618 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
T/S | rs1468330606 | -0.391 | None | N | 0.093 | 0.061 | 0.26547132957 | gnomAD-2.1.1 | 8.05E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 1.78E-05 | 0 |
T/S | rs1468330606 | -0.391 | None | N | 0.093 | 0.061 | 0.26547132957 | gnomAD-4.0.0 | 4.10663E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.39824E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0761 | likely_benign | 0.0739 | benign | -0.452 | Destabilizing | None | N | 0.08 | neutral | N | 0.492039641 | None | None | N |
T/C | 0.5332 | ambiguous | 0.4933 | ambiguous | -0.36 | Destabilizing | 0.824 | D | 0.394 | neutral | None | None | None | None | N |
T/D | 0.2346 | likely_benign | 0.2623 | benign | 0.035 | Stabilizing | 0.149 | N | 0.328 | neutral | None | None | None | None | N |
T/E | 0.2476 | likely_benign | 0.2724 | benign | 0.024 | Stabilizing | 0.081 | N | 0.315 | neutral | None | None | None | None | N |
T/F | 0.2141 | likely_benign | 0.2204 | benign | -0.609 | Destabilizing | 0.001 | N | 0.283 | neutral | None | None | None | None | N |
T/G | 0.2122 | likely_benign | 0.2124 | benign | -0.682 | Destabilizing | 0.035 | N | 0.345 | neutral | None | None | None | None | N |
T/H | 0.2188 | likely_benign | 0.2284 | benign | -0.906 | Destabilizing | 0.555 | D | 0.433 | neutral | None | None | None | None | N |
T/I | 0.1915 | likely_benign | 0.1958 | benign | 0.057 | Stabilizing | 0.117 | N | 0.369 | neutral | N | 0.520266392 | None | None | N |
T/K | 0.2499 | likely_benign | 0.2705 | benign | -0.558 | Destabilizing | 0.081 | N | 0.304 | neutral | None | None | None | None | N |
T/L | 0.1113 | likely_benign | 0.1107 | benign | 0.057 | Stabilizing | 0.035 | N | 0.311 | neutral | None | None | None | None | N |
T/M | 0.0995 | likely_benign | 0.0988 | benign | 0.05 | Stabilizing | 0.555 | D | 0.398 | neutral | None | None | None | None | N |
T/N | 0.0878 | likely_benign | 0.0922 | benign | -0.478 | Destabilizing | 0.062 | N | 0.286 | neutral | N | 0.52172783 | None | None | N |
T/P | 0.5372 | ambiguous | 0.5639 | ambiguous | -0.08 | Destabilizing | 0.317 | N | 0.399 | neutral | D | 0.529251235 | None | None | N |
T/Q | 0.2152 | likely_benign | 0.2246 | benign | -0.579 | Destabilizing | 0.38 | N | 0.412 | neutral | None | None | None | None | N |
T/R | 0.2093 | likely_benign | 0.2235 | benign | -0.338 | Destabilizing | 0.38 | N | 0.409 | neutral | None | None | None | None | N |
T/S | 0.0745 | likely_benign | 0.0761 | benign | -0.693 | Destabilizing | None | N | 0.093 | neutral | N | 0.403977939 | None | None | N |
T/V | 0.1595 | likely_benign | 0.1535 | benign | -0.08 | Destabilizing | 0.081 | N | 0.229 | neutral | None | None | None | None | N |
T/W | 0.5764 | likely_pathogenic | 0.5881 | pathogenic | -0.638 | Destabilizing | 0.935 | D | 0.457 | neutral | None | None | None | None | N |
T/Y | 0.235 | likely_benign | 0.2421 | benign | -0.367 | Destabilizing | 0.235 | N | 0.444 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.